Non-Coding RNA Search

Ss1.1-Mixn-0014h07.5

Sequence:


               
               CCTGGATTAAAAGATGAATCCTGAACAGCTCCAAATTTGTCAGTCAGATGGAGGCTTCTG
GACATGTGCATGAGATTATGCAGAAGTACAAAGGCTGAGTTTGTGTGTATAGCTGTGCAA
AAGTATGTGTACTTGAGACATGTTACTATATAGATGTCACACACATTAGCTGTACAGCCA
CATAGAACATGTACCTCTCTGATTTTGCCTGTGTGACAACACACGTTTGAAAGTGTGAGA
CACTGCACAAAAGATACCAGCAAGCATGCTGGCCTCTCTGGTGTATGCGAACCCAAATGC
ACTCACTCATCTTTGAGAACTGTGCCCAGAGGGGTCTTCGTGGCTGTGACATCTGCATAT
GGCTGTAGTTTTGGTGGCTCATCACCACCAGTCCTGCCCAGAGGCAGGGGGTGAGAGTCT
GGGGTCCAGACTCAAGTGTGTGGTCCTTTGGGTGTATCGGGGGCCCTACCCACTGCTTCT
TTTCTATTTCCCCAGCCACCGCCAGCTTCCCTCCACTCCCCTGCCCCATGCCACCCTTTC
TCCATCTTGGGGGTCATAGATCCTAAGCCATAAAATAAATTTTATTCCAAAATAACAAAA
TAAATAATCTAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCTGGATTAAAAGATGAATCCTGAACAGCTCCAAATTTGTCAGTCAGATGGAGGCTTCTG
GACATGTGCATGAGATTATGCAGAAGTACAAAGGCTGAGTTTGTGTGTATAGCTGTGCAA
AAGTATGTGTACTTGAGACATGTTACTATATAGATGTCACACACATTAGCTGTACAGCCA
CATAGAACATGTACCTCTCTGATTTTGCCTGTGTGACAACACACGTTTGAAAGTGTGAGA
CACTGCACAAAAGATACCAGCAAGCATGCTGGCCTCTCTGGTGTATGCGAACCCAAATGC
ACTCACTCATCTTTGAGAACTGTGCCCAGAGGGGTCTTCGTGGCTGTGACATCTGCATAT
GGCTGTAGTTTTGGTGGCTCATCACCACCAGTCCTGCCCAGAGGCAGGGGGTGAGAGTCT
GGGGTCCAGACTCAAGTGTGTGGTCCTTTGGGTGTATCGGGGGCCCTACCCACTGCTTCT
TTTCTATTTCCCCAGCCACCGCCAGCTTCCCTCCACTCCCCTGCCCCATGCCACCCTTTC
TCCATCTTGGGGGTCATAGATCCTAAGCCATAAAATAAATTTTATTCCAAAATAACAAAA
TAAATAATCTAC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               5-612, gnl|bosTau2|chr5 (32584944-32585550)
               

               
               5-612, gnl|Hg17|chr12 (55776058-55775475)
               

               
               5-612, gnl|Mm7|chr10 (127161818-127162357)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-612, gnl|bosTau2|chr5 (32584944-32585550)
               

               
               5-612, gnl|Hg17|chr12 (55776058-55775475)
               

               
               5-612, gnl|Mm7|chr10 (127161818-127162357)

Expressed library(ies): 5 entry(ies)

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Expressed library(ies): 5 entry(ies)

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               ill (0.175593)
               

               
               eye (0.170503)
               

               
               fhi (0.169578)
               

               
               pla (0.133672)
               

               
               jca (0.11396)

Expressed library(ies): 5 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ill (0.175593)
               

               
               eye (0.170503)
               

               
               fhi (0.169578)
               

               
               pla (0.133672)
               

               
               jca (0.11396)

	5-612, gnl\|bosTau2\|chr5 (32584944-32585550)
	5-612, gnl\|Hg17\|chr12 (55776058-55775475)
	5-612, gnl\|Mm7\|chr10 (127161818-127162357)

	ill (0.175593)
	eye (0.170503)
	fhi (0.169578)
	pla (0.133672)
	jca (0.11396)