Non-Coding RNA Search

Ss1.1-Mixn-0015e19.5

Sequence:


               
               AGGGGGGTGGAGGGGCTCCCTGGTGGGTCTCCGCAGCAGGGGTGTCCGCCGGGAGGTGGG
GGGACGGTGCTGCGTGTCCTGGCTCACGCCTTAGCAATTGTCCACGGTCCCCCTCCCCCA
AAAGTGTCCCAGTTTGTGCAGCAAGTCACAGGGCTGCACTGTTCCTAGTGGCAGAACCAG
GGAGCCTCGGGTCTGTGTCCCAGGCTCGCAGGGTGGGACCTGTCCCAGGGCACCGGGGGC
CCCTGGGAGCTCTGGGGCAGCCCCTGCGCCTGGGGGCTGATGGGCTGGGTTTCCTCCCAG
GCAGTGGGACCTGGGGGCGTGGCGGGGCCCGTCCAGATCGTCAACAACAAGTTCCTGGCC
TGGAGCGGAGTCATGGAGTGGCAAGAGGTGAGCCCTGAGCAGCCCGGGGACACGGGTCCT
CCCGGGCTTGGGTGCCTCCCGTCCTGATGGCTCCCTTCTTCTCCCCAAAAGCCCAGGCCT
GAGCCCAACAGCCGGTCTAAGAGGTGGCTGCCGTCGCATGTCTACGTGAACCAAGGGGAG
ATCCTGTGAGTGTCGGGCAGGGGAGGGAGGCACCCTTACGGGGAGACCCGGCCTCCTGAG
CCTCGTCCCCTCGTCCCCTCCCACCGCAGGCGGACCGAGCAGTGGCCCCGGAAGCTGTAC
ATGCAGCTCATCCCGCAGCAGCTTGCTGGTGAGTGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGGGGGGTGGAGGGGCTCCCTGGTGGGTCTCCGCAGCAGGGGTGTCCGCCGGGAGGTGGG
GGGACGGTGCTGCGTGTCCTGGCTCACGCCTTAGCAATTGTCCACGGTCCCCCTCCCCCA
AAAGTGTCCCAGTTTGTGCAGCAAGTCACAGGGCTGCACTGTTCCTAGTGGCAGAACCAG
GGAGCCTCGGGTCTGTGTCCCAGGCTCGCAGGGTGGGACCTGTCCCAGGGCACCGGGGGC
CCCTGGGAGCTCTGGGGCAGCCCCTGCGCCTGGGGGCTGATGGGCTGGGTTTCCTCCCAG
GCAGTGGGACCTGGGGGCGTGGCGGGGCCCGTCCAGATCGTCAACAACAAGTTCCTGGCC
TGGAGCGGAGTCATGGAGTGGCAAGAGGTGAGCCCTGAGCAGCCCGGGGACACGGGTCCT
CCCGGGCTTGGGTGCCTCCCGTCCTGATGGCTCCCTTCTTCTCCCCAAAAGCCCAGGCCT
GAGCCCAACAGCCGGTCTAAGAGGTGGCTGCCGTCGCATGTCTACGTGAACCAAGGGGAG
ATCCTGTGAGTGTCGGGCAGGGGAGGGAGGCACCCTTACGGGGAGACCCGGCCTCCTGAG
CCTCGTCCCCTCGTCCCCTCCCACCGCAGGCGGACCGAGCAGTGGCCCCGGAAGCTGTAC
ATGCAGCTCATCCCGCAGCAGCTTGCTGGTGAGTGG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               289-696, gnl|bosTau2|chr18 (48892862-48893276)
               

               
               289-696, gnl|Hg17|chr19 (55052748-55053201)
               

               
               289-696, gnl|Mm7|chr7 (41039539-41039126)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               289-696, gnl|bosTau2|chr18 (48892862-48893276)
               

               
               289-696, gnl|Hg17|chr19 (55052748-55053201)
               

               
               289-696, gnl|Mm7|chr7 (41039539-41039126)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               nmm (0.132802)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nmm (0.132802)

	289-696, gnl\|bosTau2\|chr18 (48892862-48893276)
	289-696, gnl\|Hg17\|chr19 (55052748-55053201)
	289-696, gnl\|Mm7\|chr7 (41039539-41039126)