Ss1.1-Mixn-0015g13.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGACATGGACTATATTCAGACTGATGCCATAATTAACCATGGGAATTCCGGGGGGCCGCT GGTGAACCTGGATGGTGACGTGATTGGCATAAATACACTGAAGGTAACAGCAGGAATCTC CTTTGCGATTCCCTCTGATCGTATTCGACAGTTCTTGGCAGAATTCCACGAGCGCCAGCT GAAAGGAAAGGCTCTTTCACAGAAGAAATATCTGGGTCTGCGCATGCTGCCCCTCACTAT GAACCTTCTTCAAGATATGAAAAGGCAAGATCCAGATTTCCCTGATGTGAGTTCCGGGGT TTTTGTATATGAGGTGATTCAAGGAACAGCTGCTGAAAGCTCTGGGTTGAGAGACCACGA TGTAATTGTCAGCATAAATGGACAGCCAGTCAGCACCACCACCGATGTGATTGAAGCCGT TAAGGCCAATGATTTCCTTTCCATCCTGGTTCGTCGAAAGAGTCAAACTTTGATCCTGAC AGTCACACCTGAAATAATCGATTAAGTGTCTTGAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGACATGGACTATATTCAGACTGATGCCATAATTAACCATGGGAATTCCGGGGGGCCGCT GGTGAACCTGGATGGTGACGTGATTGGCATAAATACACTGAAGGTAACAGCAGGAATCTC CTTTGCGATTCCCTCTGATCGTATTCGACAGTTCTTGGCAGAATTCCACGAGCGCCAGCT GAAAGGAAAGGCTCTTTCACAGAAGAAATATCTGGGTCTGCGCATGCTGCCCCTCACTAT GAACCTTCTTCAAGATATGAAAAGGCAAGATCCAGATTTCCCTGATGTGAGTTCCGGGGT TTTTGTATATGAGGTGATTCAAGGAACAGCTGCTGAAAGCTCTGGGTTGAGAGACCACGA TGTAATTGTCAGCATAAATGGACAGCCAGTCAGCACCACCACCGATGTGATTGAAGCCGT TAAGGCCAATGATTTCCTTTCCATCCTGGTTCGTCGAAAGAGTCAAACTTTGATCCTGAC AGTCACACCTGAAATAATCGATTAAGTGTCTTGAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 36 entry(ies) | More info |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
| 70-192, gnl|bosTau2|chr26 (29373490-29373368) | |
| 70-192, gnl|canFam2|chr28 (35154411-35154550) | |
| 70-192, gnl|danRer3|chrUn (98490761-98490613) | |
| 70-192, gnl|echTel1|scaffold_201551 (3402-3540) | |
| 70-192, gnl|fr1|chrUn (223230513-223230634) | |
| 70-192, gnl|galGal2|chr6 (30340499-30340622) | |
| 70-192, gnl|hg17|chr10 (124258140-124258279) | |
| 70-192, gnl|Hg17|chr10 (124258161-124258289) | |
| 70-192, gnl|loxAfr1|scaffold_10999 (16914-17055) | |
| 70-192, gnl|mm7|chr7 (127335386-127335524) | |
| 70-192, gnl|Mm7|chr7 (127335406-127335532) | |
| 70-192, gnl|monDom2|scaffold_14 (36662965-36662827) | |
| 70-192, gnl|oryCun1|scaffold_199093 (94888-94751) | |
| 70-192, gnl|panTro1|chr8 (126578751-126578890) | |
| 70-192, gnl|rheMac2|chr9 (122124785-122124924) | |
| 70-192, gnl|rn3|chr1 (190454312-190454448) | |
| 70-192, gnl|tetNig1|chrUn_random (9508310-9508438) | |
| 70-192, gnl|xenTro1|scaffold_190 (1043461-1043598) | |
| 338-513, gnl|bosTau2|chr27 (22691427-22691602) | |
| 338-513, gnl|canFam2|chr16 (29512190-29512006) | |
| 338-513, gnl|danRer3|chrNA (61820176-61820362) | |
| 338-513, gnl|dasNov1|scaffold_11838 (49335-49154) | |
| 338-513, gnl|echTel1|scaffold_236927 (2798-2980) | |
| 338-513, gnl|fr1|chrUn (223232428-223232604) | |
| 338-513, gnl|galGal2|chr4 (81193763-81193946) | |
| 338-513, gnl|hg17|chr8 (38964597-38964778) | |
| 338-513, gnl|Hg17|chr8 (38964610-38964782) | |
| 338-513, gnl|loxAfr1|scaffold_131162 (650-832) | |
| 338-513, gnl|mm7|chr8 (23779511-23779329) | |
| 338-513, gnl|Mm7|chr8 (23779498-23779323) | |
| 338-513, gnl|monDom2|scaffold_1 (83524954-83524770) | |
| 338-513, gnl|oryCun1|scaffold_198354 (6283-6087) | |
| 338-513, gnl|panTro1|chr7 (40350315-40350496) | |
| 338-513, gnl|rheMac2|chr8 (39468233-39468413) | |
| 338-513, gnl|rn3|chr16 (71438299-71438481) | |
| 338-513, gnl|xenTro1|scaffold_190 (1046051-1046232) |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 70-192, gnl|bosTau2|chr26 (29373490-29373368) | |
| 70-192, gnl|canFam2|chr28 (35154411-35154550) | |
| 70-192, gnl|danRer3|chrUn (98490761-98490613) | |
| 70-192, gnl|echTel1|scaffold_201551 (3402-3540) | |
| 70-192, gnl|fr1|chrUn (223230513-223230634) | |
| 70-192, gnl|galGal2|chr6 (30340499-30340622) | |
| 70-192, gnl|hg17|chr10 (124258140-124258279) | |
| 70-192, gnl|Hg17|chr10 (124258161-124258289) | |
| 70-192, gnl|loxAfr1|scaffold_10999 (16914-17055) | |
| 70-192, gnl|mm7|chr7 (127335386-127335524) | |
| 70-192, gnl|Mm7|chr7 (127335406-127335532) | |
| 70-192, gnl|monDom2|scaffold_14 (36662965-36662827) | |
| 70-192, gnl|oryCun1|scaffold_199093 (94888-94751) | |
| 70-192, gnl|panTro1|chr8 (126578751-126578890) | |
| 70-192, gnl|rheMac2|chr9 (122124785-122124924) | |
| 70-192, gnl|rn3|chr1 (190454312-190454448) | |
| 70-192, gnl|tetNig1|chrUn_random (9508310-9508438) | |
| 70-192, gnl|xenTro1|scaffold_190 (1043461-1043598) | |
| 338-513, gnl|bosTau2|chr27 (22691427-22691602) | |
| 338-513, gnl|canFam2|chr16 (29512190-29512006) | |
| 338-513, gnl|danRer3|chrNA (61820176-61820362) | |
| 338-513, gnl|dasNov1|scaffold_11838 (49335-49154) | |
| 338-513, gnl|echTel1|scaffold_236927 (2798-2980) | |
| 338-513, gnl|fr1|chrUn (223232428-223232604) | |
| 338-513, gnl|galGal2|chr4 (81193763-81193946) | |
| 338-513, gnl|hg17|chr8 (38964597-38964778) | |
| 338-513, gnl|Hg17|chr8 (38964610-38964782) | |
| 338-513, gnl|loxAfr1|scaffold_131162 (650-832) | |
| 338-513, gnl|mm7|chr8 (23779511-23779329) | |
| 338-513, gnl|Mm7|chr8 (23779498-23779323) | |
| 338-513, gnl|monDom2|scaffold_1 (83524954-83524770) | |
| 338-513, gnl|oryCun1|scaffold_198354 (6283-6087) | |
| 338-513, gnl|panTro1|chr7 (40350315-40350496) | |
| 338-513, gnl|rheMac2|chr8 (39468233-39468413) | |
| 338-513, gnl|rn3|chr16 (71438299-71438481) | |
| 338-513, gnl|xenTro1|scaffold_190 (1046051-1046232) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| isp (0.150376) | |
| ova (0.129132) | |
| jca (0.11396) |