Non-Coding RNA Search

Ss1.1-Mixn-0015i06.5

Sequence:


               
               CCACAGCATCCGCTGGAAGCTCTGCTGTACCCTGGTGTTTGGTCCTAAATTTGAAGGCTC
CATAGAGTCTCTATAGTTCATGGCTAGTTGGGAAGAAAGGAGGTGGGGATGGGGGTGAGG
AAATGGGTAAAAATTCTTTTTGGCTTTCTTCTGATCTGTCAGTACCCTTTTGTCTCTAGG
ACAGCCTTTGGACTTAAATACCTTCTCCCCAGTCAGGTTTTGCTGCTGCTGAATTTTCTT
CTTCTTCTGGCCGCCTGCTGTGCTCTATTCCCCAGTCTACTCAACTTTGGAAGTGAATTT
AAATTAATTACAGATAGACACTGATTTTGTTGTCAGGAAAGTGAGCTTTGTGGAGAAACC
TACCCATCTGGGAGTCCACACGTGTCCTTTTCCCTAAATCCTGCACTGAATGAATCAGAA
AGCAGGGTGCACAGCTTTTGTTTCAATGTGATTACTCGTGGTCAACTTGGCATCAGAAGG
AAAACGAAGCTTTTGAATTGGATGTTTCCGTAACACCCTTCCCCTGTCCAGTCCCCCCCC
ACCTCTACTAGCTAAAGTCTCTTATGAAACCGAGAAGAGTTGTTGACGTCTCACTCCTTC
CATTAAATTAATAAGTACTGACCTCCTAATATTTAAGTGTTTACTATCTATTGCTGTAAA
GTTTTGTATATTTTGTAAACTTCTTTTCCCAAATAGTAGATGTCTAAAATCGTTGAACAT
CTGATTCTTTTATATTCCATTGTTCGGCACAAAGTGTGGTTTTTATTTAGAATAAAAAAA
AAGGAAATTTGAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCACAGCATCCGCTGGAAGCTCTGCTGTACCCTGGTGTTTGGTCCTAAATTTGAAGGCTC
CATAGAGTCTCTATAGTTCATGGCTAGTTGGGAAGAAAGGAGGTGGGGATGGGGGTGAGG
AAATGGGTAAAAATTCTTTTTGGCTTTCTTCTGATCTGTCAGTACCCTTTTGTCTCTAGG
ACAGCCTTTGGACTTAAATACCTTCTCCCCAGTCAGGTTTTGCTGCTGCTGAATTTTCTT
CTTCTTCTGGCCGCCTGCTGTGCTCTATTCCCCAGTCTACTCAACTTTGGAAGTGAATTT
AAATTAATTACAGATAGACACTGATTTTGTTGTCAGGAAAGTGAGCTTTGTGGAGAAACC
TACCCATCTGGGAGTCCACACGTGTCCTTTTCCCTAAATCCTGCACTGAATGAATCAGAA
AGCAGGGTGCACAGCTTTTGTTTCAATGTGATTACTCGTGGTCAACTTGGCATCAGAAGG
AAAACGAAGCTTTTGAATTGGATGTTTCCGTAACACCCTTCCCCTGTCCAGTCCCCCCCC
ACCTCTACTAGCTAAAGTCTCTTATGAAACCGAGAAGAGTTGTTGACGTCTCACTCCTTC
CATTAAATTAATAAGTACTGACCTCCTAATATTTAAGTGTTTACTATCTATTGCTGTAAA
GTTTTGTATATTTTGTAAACTTCTTTTCCCAAATAGTAGATGTCTAAAATCGTTGAACAT
CTGATTCTTTTATATTCCATTGTTCGGCACAAAGTGTGGTTTTTATTTAGAATAAAAAAA
AAGGAAATTTGAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               538-803, gnl|bosTau2|chr15 (8604706-8604967)
               

               
               538-803, gnl|Hg17|chr12 (55679140-55678906)
               

               
               538-803, gnl|Mm7|chr10 (127248478-127248738)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               538-803, gnl|bosTau2|chr15 (8604706-8604967)
               

               
               538-803, gnl|Hg17|chr12 (55679140-55678906)
               

               
               538-803, gnl|Mm7|chr10 (127248478-127248738)

Expressed library(ies): 5 entry(ies)

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Expressed library(ies): 5 entry(ies)

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               clu (1.43575)
               

               
               sag (0.36543)
               

               
               aor (0.195274)
               

               
               ova (0.129132)
               

               
               thg (0.126791)

Expressed library(ies): 5 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               clu (1.43575)
               

               
               sag (0.36543)
               

               
               aor (0.195274)
               

               
               ova (0.129132)
               

               
               thg (0.126791)

	538-803, gnl\|bosTau2\|chr15 (8604706-8604967)
	538-803, gnl\|Hg17\|chr12 (55679140-55678906)
	538-803, gnl\|Mm7\|chr10 (127248478-127248738)

	clu (1.43575)
	sag (0.36543)
	aor (0.195274)
	ova (0.129132)
	thg (0.126791)