Non-Coding RNA Search

Ss1.1-Mixn-0015p01.5

Sequence:


               
               ATCTGTCTTTTCTTTTTCTCTCCCTTCTCTCCCCCACGGGAGGTAGGGAAACACTTTTTT
TACCAGAGTTGGCTTTAAAGAGGTTTCTCATCCTCTGTGCATTTTCCCTTGATATTGAAA
TTATTTTCTCTTGTTTAATCCAGAGCCTGCTGAGAAGCTCTGTGAGCGGTAGGAAGTGAG
GTGGGTTTGCTCTATTTTTTGGATGGTGTTGCATTTTTACGCTTAACCCGAGGGTGCGTC
TCAGTTATGCTCACTCTGTTTCATACAAGTTAACGGTGGAGGTGGAAGAGAGTCAGGATT
CTGGGTTTTAGGATCGGTTTAGCATTCTGTCCTGGGAGAGGGGTTCAGACACCCAGCCTC
ATCAAAGCTGGGGTGAGGGGTAGAGCGAGGGCCACTTAAGCCCCCAATCAGGGGAGGGCA
CATAGAAGCAGCTCTCCTTCCGGTTGCCACTTTATATCGTGTGTTTCCTGAGTTTCCATG
TGTATATTTCATCGTCTTGTGTATCTGCTTCCTGAGGGGTCTGGAACATTCTCCTGGAGT
CCCTCCCACATGGCTTCCTCACACAGCTGTTTGCAACATGCTTTATTGCCGTCACCCACA
GGACACCATCTCTACGCAGAAGTATACATTTTGCTCTTTGGACTTTGAAAGTAGTTTTTT
GACGATTAGACTTTCTGTTAGCATATTGCTCAAGCATTACAGAATGTATGTACCTAGTCC
CCTCAACCATCTCCTCCGCCCCGGGATGTTCTAATAAAAGTTGTTTTCTTTTTCTAAAAA
AAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATCTGTCTTTTCTTTTTCTCTCCCTTCTCTCCCCCACGGGAGGTAGGGAAACACTTTTTT
TACCAGAGTTGGCTTTAAAGAGGTTTCTCATCCTCTGTGCATTTTCCCTTGATATTGAAA
TTATTTTCTCTTGTTTAATCCAGAGCCTGCTGAGAAGCTCTGTGAGCGGTAGGAAGTGAG
GTGGGTTTGCTCTATTTTTTGGATGGTGTTGCATTTTTACGCTTAACCCGAGGGTGCGTC
TCAGTTATGCTCACTCTGTTTCATACAAGTTAACGGTGGAGGTGGAAGAGAGTCAGGATT
CTGGGTTTTAGGATCGGTTTAGCATTCTGTCCTGGGAGAGGGGTTCAGACACCCAGCCTC
ATCAAAGCTGGGGTGAGGGGTAGAGCGAGGGCCACTTAAGCCCCCAATCAGGGGAGGGCA
CATAGAAGCAGCTCTCCTTCCGGTTGCCACTTTATATCGTGTGTTTCCTGAGTTTCCATG
TGTATATTTCATCGTCTTGTGTATCTGCTTCCTGAGGGGTCTGGAACATTCTCCTGGAGT
CCCTCCCACATGGCTTCCTCACACAGCTGTTTGCAACATGCTTTATTGCCGTCACCCACA
GGACACCATCTCTACGCAGAAGTATACATTTTGCTCTTTGGACTTTGAAAGTAGTTTTTT
GACGATTAGACTTTCTGTTAGCATATTGCTCAAGCATTACAGAATGTATGTACCTAGTCC
CCTCAACCATCTCCTCCGCCCCGGGATGTTCTAATAAAAGTTGTTTTCTTTTTCTAAAAA
AAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               1-771, gnl|bosTau2|chr26 (23237718-23236932)
               

               
               1-771, gnl|Hg17|chr10 (117807191-117806440)
               

               
               1-771, gnl|Mm7|chr19 (58148133-58147432)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-771, gnl|bosTau2|chr26 (23237718-23236932)
               

               
               1-771, gnl|Hg17|chr10 (117807191-117806440)
               

               
               1-771, gnl|Mm7|chr19 (58148133-58147432)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               fbs (0.350693)
               

               
               ebs (0.118301)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fbs (0.350693)
               

               
               ebs (0.118301)

	1-771, gnl\|bosTau2\|chr26 (23237718-23236932)
	1-771, gnl\|Hg17\|chr10 (117807191-117806440)
	1-771, gnl\|Mm7\|chr19 (58148133-58147432)