Ss1.1-Mixn-0016e03.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGCCGGCGGAACATGGCGCCCTGTACGCTGTGGCGCTGCTGCCAGCGCAGCGTGGGCTGG GTGCCGGTGCTCTTCATCACCTTCGTGGTCGTGTGGTCCTACTACGCGTACGTGGTGGAG CTCTGCGTGTTTACTCTTTCCGGAAATGGAGAAAACGGAAAGGCCGTTGTTTACCTTGTG GCTTTCCATCTGTTCTTTGTTATGTTTGTATGGTCCTATTGGATGACAATTTTCACATCT CCCGCTTCCCCCTCCAAAGAGTTCTACTTGTCCAGTTCCGAGAAGGAACGTTACGAGAAG GAGTTCAGCCAGGAAAGACAACAGGAGATTCTGAGAAGAGCGGCGAGGGGCTTGCCTGTC TACACCACGTCGGCGACACAGACCATCAGATACTGTGAGAGATGTCAGCTGATTAAGCCC GACCGTGCGCATCACTGCTCAGCATGTGACATATGTGTTCTTAAGATGGATCATCACTGT CCTTGGGTGAACAACTGTGTGGGATTTTCTAATTACAAATTCTTCCTGCTGTTTTTACTG TACTCTCTACTGTACTGCCTTTTTGTGGCTACAACAGTTTTACAGTACTTTATAAAATTT TGGACGAACGAACTCTCAGATACACGTGCAAAATTCCACGTACTTTTTCTGTTCTTTGTG TCTACAATGTTCTTCATCAGCGTATTGTCACTTCTCAGCTACCACTGCTGGCTTGTTGGA AAGAACAGAACAACCATAGAATCGTTCCGTGCTCCCACATTTTCATATGGACCTGATGGA AATGGCTTCTCT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGCCGGCGGAACATGGCGCCCTGTACGCTGTGGCGCTGCTGCCAGCGCAGCGTGGGCTGG GTGCCGGTGCTCTTCATCACCTTCGTGGTCGTGTGGTCCTACTACGCGTACGTGGTGGAG CTCTGCGTGTTTACTCTTTCCGGAAATGGAGAAAACGGAAAGGCCGTTGTTTACCTTGTG GCTTTCCATCTGTTCTTTGTTATGTTTGTATGGTCCTATTGGATGACAATTTTCACATCT CCCGCTTCCCCCTCCAAAGAGTTCTACTTGTCCAGTTCCGAGAAGGAACGTTACGAGAAG GAGTTCAGCCAGGAAAGACAACAGGAGATTCTGAGAAGAGCGGCGAGGGGCTTGCCTGTC TACACCACGTCGGCGACACAGACCATCAGATACTGTGAGAGATGTCAGCTGATTAAGCCC GACCGTGCGCATCACTGCTCAGCATGTGACATATGTGTTCTTAAGATGGATCATCACTGT CCTTGGGTGAACAACTGTGTGGGATTTTCTAATTACAAATTCTTCCTGCTGTTTTTACTG TACTCTCTACTGTACTGCCTTTTTGTGGCTACAACAGTTTTACAGTACTTTATAAAATTT TGGACGAACGAACTCTCAGATACACGTGCAAAATTCCACGTACTTTTTCTGTTCTTTGTG TCTACAATGTTCTTCATCAGCGTATTGTCACTTCTCAGCTACCACTGCTGGCTTGTTGGA AAGAACAGAACAACCATAGAATCGTTCCGTGCTCCCACATTTTCATATGGACCTGATGGA AATGGCTTCTCT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 52 entry(ies) | More info |
| Aligned organism(s): 52 entry(ies) | Help | Less info |
| 1-130, gnl|bosTau2|chr12 (20178816-20178687) | |
| 1-130, gnl|canFam2|chr25 (19867755-19867624) | |
| 1-130, gnl|danRer3|chr10 (32899771-32899641) | |
| 1-130, gnl|dasNov1|scaffold_131293 (2547-2427) | |
| 1-130, gnl|echTel1|scaffold_255201 (3217-3346) | |
| 1-130, gnl|fr1|chrUn (205891874-205892016) | |
| 1-130, gnl|hg17|chr13 (20931176-20931314) | |
| 1-130, gnl|Hg17|chr13 (20931326-20931193) | |
| 1-130, gnl|mm7|chr14 (52757967-52758105) | |
| 1-130, gnl|Mm7|chr14 (52758113-52757984) | |
| 1-130, gnl|oryCun1|scaffold_131189 (21437-21577) | |
| 1-130, gnl|panTro1|chr14 (20091471-20091609) | |
| 1-130, gnl|rheMac2|chr17 (2089689-2089827) | |
| 1-130, gnl|rn3|chr15 (36950382-36950520) | |
| 1-130, gnl|tetNig1|chr7 (4168848-4168973) | |
| 157-261, gnl|bosTau2|chr12 (21114504-21114608) | |
| 157-261, gnl|canFam2|chr25 (19899046-19898943) | |
| 157-261, gnl|danRer3|chr24 (23376219-23376117) | |
| 157-261, gnl|dasNov1|scaffold_116138 (830-933) | |
| 157-261, gnl|echTel1|scaffold_276328 (39112-39215) | |
| 157-261, gnl|fr1|chrUn (205890806-205890909) | |
| 157-261, gnl|galGal2|chr1 (170542615-170542512) | |
| 157-261, gnl|hg17|chr13 (20893196-20893299) | |
| 157-261, gnl|Hg17|chr13 (68457335-68457437) | |
| 157-261, gnl|loxAfr1|scaffold_83482 (6707-6810) | |
| 157-261, gnl|mm7|chr14 (52741810-52741913) | |
| 157-261, gnl|Mm7|chr14 (52741918-52741815) | |
| 157-261, gnl|monDom2|scaffold_15 (29128355-29128458) | |
| 157-261, gnl|oryCun1|scaffold_204946 (91107-91210) | |
| 157-261, gnl|panTro1|chr14 (20055539-20055642) | |
| 157-261, gnl|rheMac2|chr17 (2053673-2053776) | |
| 157-261, gnl|rn3|chr15 (36931401-36931504) | |
| 157-261, gnl|tetNig1|chr6 (1466543-1466644) | |
| 319-596, gnl|bosTau2|chr15 (34897829-34897551) | |
| 319-596, gnl|Hg17|chr11 (74617351-74617073) | |
| 319-596, gnl|Mm7|chr7 (95668201-95668479) | |
| 606-739, gnl|bosTau2|chr12 (21133794-21133927) | |
| 606-739, gnl|canFam2|chr25 (19925129-19925000) | |
| 606-739, gnl|danRer3|chr5 (48129570-48129699) | |
| 606-739, gnl|dasNov1|scaffold_41772 (3760-3889) | |
| 606-739, gnl|echTel1|scaffold_276328 (25164-25295) | |
| 606-739, gnl|fr1|chrUn (205889308-205889437) | |
| 606-739, gnl|Hg17|chr13 (68457784-68457912) | |
| 606-739, gnl|hg17|chr6 (29784178-29784308) | |
| 606-739, gnl|loxAfr1|scaffold_14639 (23216-23345) | |
| 606-739, gnl|mm7|chr14 (52714848-52714986) | |
| 606-739, gnl|Mm7|chr14 (52714984-52714842) | |
| 606-739, gnl|oryCun1|scaffold_149130 (16220-16105) | |
| 606-739, gnl|panTro1|chr5 (30295973-30296103) | |
| 606-739, gnl|rheMac2|chr4 (29439218-29439348) | |
| 606-739, gnl|rn3|chr15 (36907584-36907690) | |
| 606-739, gnl|tetNig1|chr7 (4166263-4166393) |
| Aligned organism(s): 52 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-130, gnl|bosTau2|chr12 (20178816-20178687) | |
| 1-130, gnl|canFam2|chr25 (19867755-19867624) | |
| 1-130, gnl|danRer3|chr10 (32899771-32899641) | |
| 1-130, gnl|dasNov1|scaffold_131293 (2547-2427) | |
| 1-130, gnl|echTel1|scaffold_255201 (3217-3346) | |
| 1-130, gnl|fr1|chrUn (205891874-205892016) | |
| 1-130, gnl|hg17|chr13 (20931176-20931314) | |
| 1-130, gnl|Hg17|chr13 (20931326-20931193) | |
| 1-130, gnl|mm7|chr14 (52757967-52758105) | |
| 1-130, gnl|Mm7|chr14 (52758113-52757984) | |
| 1-130, gnl|oryCun1|scaffold_131189 (21437-21577) | |
| 1-130, gnl|panTro1|chr14 (20091471-20091609) | |
| 1-130, gnl|rheMac2|chr17 (2089689-2089827) | |
| 1-130, gnl|rn3|chr15 (36950382-36950520) | |
| 1-130, gnl|tetNig1|chr7 (4168848-4168973) | |
| 157-261, gnl|bosTau2|chr12 (21114504-21114608) | |
| 157-261, gnl|canFam2|chr25 (19899046-19898943) | |
| 157-261, gnl|danRer3|chr24 (23376219-23376117) | |
| 157-261, gnl|dasNov1|scaffold_116138 (830-933) | |
| 157-261, gnl|echTel1|scaffold_276328 (39112-39215) | |
| 157-261, gnl|fr1|chrUn (205890806-205890909) | |
| 157-261, gnl|galGal2|chr1 (170542615-170542512) | |
| 157-261, gnl|hg17|chr13 (20893196-20893299) | |
| 157-261, gnl|Hg17|chr13 (68457335-68457437) | |
| 157-261, gnl|loxAfr1|scaffold_83482 (6707-6810) | |
| 157-261, gnl|mm7|chr14 (52741810-52741913) | |
| 157-261, gnl|Mm7|chr14 (52741918-52741815) | |
| 157-261, gnl|monDom2|scaffold_15 (29128355-29128458) | |
| 157-261, gnl|oryCun1|scaffold_204946 (91107-91210) | |
| 157-261, gnl|panTro1|chr14 (20055539-20055642) | |
| 157-261, gnl|rheMac2|chr17 (2053673-2053776) | |
| 157-261, gnl|rn3|chr15 (36931401-36931504) | |
| 157-261, gnl|tetNig1|chr6 (1466543-1466644) | |
| 319-596, gnl|bosTau2|chr15 (34897829-34897551) | |
| 319-596, gnl|Hg17|chr11 (74617351-74617073) | |
| 319-596, gnl|Mm7|chr7 (95668201-95668479) | |
| 606-739, gnl|bosTau2|chr12 (21133794-21133927) | |
| 606-739, gnl|canFam2|chr25 (19925129-19925000) | |
| 606-739, gnl|danRer3|chr5 (48129570-48129699) | |
| 606-739, gnl|dasNov1|scaffold_41772 (3760-3889) | |
| 606-739, gnl|echTel1|scaffold_276328 (25164-25295) | |
| 606-739, gnl|fr1|chrUn (205889308-205889437) | |
| 606-739, gnl|Hg17|chr13 (68457784-68457912) | |
| 606-739, gnl|hg17|chr6 (29784178-29784308) | |
| 606-739, gnl|loxAfr1|scaffold_14639 (23216-23345) | |
| 606-739, gnl|mm7|chr14 (52714848-52714986) | |
| 606-739, gnl|Mm7|chr14 (52714984-52714842) | |
| 606-739, gnl|oryCun1|scaffold_149130 (16220-16105) | |
| 606-739, gnl|panTro1|chr5 (30295973-30296103) | |
| 606-739, gnl|rheMac2|chr4 (29439218-29439348) | |
| 606-739, gnl|rn3|chr15 (36907584-36907690) | |
| 606-739, gnl|tetNig1|chr7 (4166263-4166393) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cty (0.20816) | |
| sin (0.174948) |