Ss1.1-Mixn-0016k06.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGGACATCTCATCTCTGCTCTGGCGGCGCAGAGATGACATCCTGCAAAATGCCAGACCCT GGCGAGCGGGGCGCGGAAGCGGGGAGCTTGCGCACAATGTCCTGCAAACACCGCCCTCTT GTGGTGCGGTCGGTGAACTGCGTTCAGGTCCAAAATCGCGCTGCTTATGTGATCCGAACT GAAGTGGTTATTTCCCACCTTGAATCATCACACTTCATTTTGCTCTTTGCTGTACAGCCA CAGAATCCGTACACGCCGACACTCTCCATCATGGGGGAAGAAGGCGGCGGCCGCAGCTGT GGGACCACTAGGGAGCTGCAGAAGCTGAAGCAGCAGGCGTTGGAGTACTACCGGGAGAAC GACGTTCCGCGCAGGCTGGAAGAGCTGCTCAACTCCACCTTCTACCTCCAGCCTGCCGAC GTCTACGGGCACCTGGCAAACTGCTTTTCTAAACTTGCAAAGCCTCCCACCATATACAAA GTAGTGGGGAAAAATGTACTGGATGGCCTGGGGCTTCCAACCTTACAAGTGGAAATATTC TGCACCATTCAAAATTTTCCCAAGAGCATATGTTCTGTGGTGATCTCAACTCACTTCGAA GTCCACGAGAACGCCTTACCTGAACTGGTAGAAGCGGAGGAAGTAGAAAGAGCGGATGCC GTCAGCACGGCGGTGCGATGGGTCAATGAAACCATCACCGAGGAGCTTCGGGGCATCGAG CCCTCCAACCAGGCTGGTGTGGATCAGGTGCTCAGGATATTCTTTGAAAATAAAGTACAA GAAGATAAGGAGAGAAAAGAATTGGAGAAGAGTCTGGAAGACTCAACAGTGCCTGTACCT TCACCTCTAACACAACCACCCCCACCTCCTCTACCTCCAGACAAAAAAAAAGGACAAAAG CAAGGGAGGAGGGATACTTTCACAGAAAAACCAATTTTACCTCCAGAACCTGATGAACAC GTACTCTGTGGCAGCATGGCCATAGGGGCTGTGTCACTGGCTGTTGCCAAAACCGGTGCC ATGCTGGACGGTAATCCCCTATACCTCAATATTGCACTACTGAAGCACCACCAGCCCCCT CCTCCAAAAACAGAGACAAAGAGAGGTCATAACGGAGGCAAGAGAGGTCAAAGTAAAGGA AAGTATGAAGTAATGATGGGAACCTACAAAAATGCAGCTGAGATGGTTGACCTGTATGTG GATCTGATCAATAAGTTCCCCTCAATTATTGCCTTGATTGATCCTTTC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGGACATCTCATCTCTGCTCTGGCGGCGCAGAGATGACATCCTGCAAAATGCCAGACCCT GGCGAGCGGGGCGCGGAAGCGGGGAGCTTGCGCACAATGTCCTGCAAACACCGCCCTCTT GTGGTGCGGTCGGTGAACTGCGTTCAGGTCCAAAATCGCGCTGCTTATGTGATCCGAACT GAAGTGGTTATTTCCCACCTTGAATCATCACACTTCATTTTGCTCTTTGCTGTACAGCCA CAGAATCCGTACACGCCGACACTCTCCATCATGGGGGAAGAAGGCGGCGGCCGCAGCTGT GGGACCACTAGGGAGCTGCAGAAGCTGAAGCAGCAGGCGTTGGAGTACTACCGGGAGAAC GACGTTCCGCGCAGGCTGGAAGAGCTGCTCAACTCCACCTTCTACCTCCAGCCTGCCGAC GTCTACGGGCACCTGGCAAACTGCTTTTCTAAACTTGCAAAGCCTCCCACCATATACAAA GTAGTGGGGAAAAATGTACTGGATGGCCTGGGGCTTCCAACCTTACAAGTGGAAATATTC TGCACCATTCAAAATTTTCCCAAGAGCATATGTTCTGTGGTGATCTCAACTCACTTCGAA GTCCACGAGAACGCCTTACCTGAACTGGTAGAAGCGGAGGAAGTAGAAAGAGCGGATGCC GTCAGCACGGCGGTGCGATGGGTCAATGAAACCATCACCGAGGAGCTTCGGGGCATCGAG CCCTCCAACCAGGCTGGTGTGGATCAGGTGCTCAGGATATTCTTTGAAAATAAAGTACAA GAAGATAAGGAGAGAAAAGAATTGGAGAAGAGTCTGGAAGACTCAACAGTGCCTGTACCT TCACCTCTAACACAACCACCCCCACCTCCTCTACCTCCAGACAAAAAAAAAGGACAAAAG CAAGGGAGGAGGGATACTTTCACAGAAAAACCAATTTTACCTCCAGAACCTGATGAACAC GTACTCTGTGGCAGCATGGCCATAGGGGCTGTGTCACTGGCTGTTGCCAAAACCGGTGCC ATGCTGGACGGTAATCCCCTATACCTCAATATTGCACTACTGAAGCACCACCAGCCCCCT CCTCCAAAAACAGAGACAAAGAGAGGTCATAACGGAGGCAAGAGAGGTCAAAGTAAAGGA AAGTATGAAGTAATGATGGGAACCTACAAAAATGCAGCTGAGATGGTTGACCTGTATGTG GATCTGATCAATAAGTTCCCCTCAATTATTGCCTTGATTGATCCTTTC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 59 entry(ies) | More info |
| Aligned organism(s): 59 entry(ies) | Help | Less info |
| 4-181, gnl|bosTau2|chr26 (24042373-24042542) | |
| 4-181, gnl|Hg17|chr10 (118537634-118537810) | |
| 263-436, gnl|bosTau2|chr26 (24098646-24098820) | |
| 263-436, gnl|canFam2|chr28 (30393807-30394016) | |
| 263-436, gnl|dasNov1|scaffold_67642 (3116-2907) | |
| 263-436, gnl|echTel1|scaffold_206780 (3607-3399) | |
| 263-436, gnl|hg17|chr10 (118598993-118599202) | |
| 263-436, gnl|Hg17|chr10 (118599059-118599233) | |
| 263-436, gnl|loxAfr1|scaffold_4020 (5823-5615) | |
| 263-436, gnl|mm7|chr19 (58865601-58865809) | |
| 263-436, gnl|Mm7|chr19 (58865666-58865840) | |
| 263-436, gnl|monDom2|scaffold_14 (44386215-44386005) | |
| 263-436, gnl|oryCun1|scaffold_205400 (65892-66100) | |
| 263-436, gnl|panTro1|chr8 (120786738-120786946) | |
| 263-436, gnl|rheMac2|chr9 (116480124-116480333) | |
| 263-436, gnl|rn3|chr1 (265677487-265677695) | |
| 546-756, gnl|bosTau2|chr26 (24104766-24104975) | |
| 546-756, gnl|canFam2|chr28 (30399878-30400345) | |
| 546-756, gnl|dasNov1|scaffold_891 (91279-90822) | |
| 546-756, gnl|echTel1|scaffold_321247 (44009-43545) | |
| 546-756, gnl|hg17|chr10 (118605743-118606187) | |
| 546-756, gnl|Hg17|chr10 (118605975-118606184) | |
| 546-756, gnl|loxAfr1|scaffold_4020 (805-349) | |
| 546-756, gnl|mm7|chr19 (58868605-58869064) | |
| 546-756, gnl|Mm7|chr19 (58868852-58869061) | |
| 546-756, gnl|monDom2|scaffold_14 (44378962-44378547) | |
| 546-756, gnl|oryCun1|scaffold_205400 (69951-70414) | |
| 546-756, gnl|panTro1|chr8 (120793453-120793897) | |
| 546-756, gnl|rheMac2|chr9 (116486861-116487300) | |
| 546-756, gnl|rn3|chr1 (265680336-265680797) | |
| 903-1074, gnl|bosTau2|chr26 (24108981-24109152) | |
| 903-1074, gnl|canFam2|chr28 (30405236-30405713) | |
| 903-1074, gnl|dasNov1|scaffold_891 (87437-86942) | |
| 903-1074, gnl|echTel1|scaffold_321247 (39373-38849) | |
| 903-1074, gnl|hg17|chr10 (118610269-118610722) | |
| 903-1074, gnl|Hg17|chr10 (118610293-118610464) | |
| 903-1074, gnl|loxAfr1|scaffold_241 (1970-2453) | |
| 903-1074, gnl|mm7|chr19 (58877306-58877796) | |
| 903-1074, gnl|Mm7|chr19 (58877359-58877530) | |
| 903-1074, gnl|monDom2|scaffold_14 (44376700-44376261) | |
| 903-1074, gnl|oryCun1|scaffold_205400 (75399-75877) | |
| 903-1074, gnl|panTro1|chr8 (120797998-120798451) | |
| 903-1074, gnl|rheMac2|chr9 (116491100-116491553) | |
| 903-1074, gnl|rn3|chr1 (265686908-265687387) | |
| 1129-1248, gnl|bosTau2|chr26 (24118767-24118886) | |
| 1129-1248, gnl|canFam2|chr28 (30413180-30413335) | |
| 1129-1248, gnl|dasNov1|scaffold_14920 (32242-32086) | |
| 1129-1248, gnl|echTel1|scaffold_292919 (9613-9766) | |
| 1129-1248, gnl|galGal2|chr6 (28023565-28023744) | |
| 1129-1248, gnl|hg17|chr10 (118623545-118623710) | |
| 1129-1248, gnl|Hg17|chr10 (118623574-118623693) | |
| 1129-1248, gnl|loxAfr1|scaffold_241 (14680-14840) | |
| 1129-1248, gnl|mm7|chr19 (58884975-58885133) | |
| 1129-1248, gnl|Mm7|chr19 (58884997-58885116) | |
| 1129-1248, gnl|monDom2|scaffold_14 (44365236-44365070) | |
| 1129-1248, gnl|oryCun1|scaffold_205400 (88143-88303) | |
| 1129-1248, gnl|panTro1|chr8 (120811354-120811519) | |
| 1129-1248, gnl|rheMac2|chr9 (116506011-116506176) | |
| 1129-1248, gnl|rn3|chr1 (265693088-265693246) |
| Aligned organism(s): 59 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 4-181, gnl|bosTau2|chr26 (24042373-24042542) | |
| 4-181, gnl|Hg17|chr10 (118537634-118537810) | |
| 263-436, gnl|bosTau2|chr26 (24098646-24098820) | |
| 263-436, gnl|canFam2|chr28 (30393807-30394016) | |
| 263-436, gnl|dasNov1|scaffold_67642 (3116-2907) | |
| 263-436, gnl|echTel1|scaffold_206780 (3607-3399) | |
| 263-436, gnl|hg17|chr10 (118598993-118599202) | |
| 263-436, gnl|Hg17|chr10 (118599059-118599233) | |
| 263-436, gnl|loxAfr1|scaffold_4020 (5823-5615) | |
| 263-436, gnl|mm7|chr19 (58865601-58865809) | |
| 263-436, gnl|Mm7|chr19 (58865666-58865840) | |
| 263-436, gnl|monDom2|scaffold_14 (44386215-44386005) | |
| 263-436, gnl|oryCun1|scaffold_205400 (65892-66100) | |
| 263-436, gnl|panTro1|chr8 (120786738-120786946) | |
| 263-436, gnl|rheMac2|chr9 (116480124-116480333) | |
| 263-436, gnl|rn3|chr1 (265677487-265677695) | |
| 546-756, gnl|bosTau2|chr26 (24104766-24104975) | |
| 546-756, gnl|canFam2|chr28 (30399878-30400345) | |
| 546-756, gnl|dasNov1|scaffold_891 (91279-90822) | |
| 546-756, gnl|echTel1|scaffold_321247 (44009-43545) | |
| 546-756, gnl|hg17|chr10 (118605743-118606187) | |
| 546-756, gnl|Hg17|chr10 (118605975-118606184) | |
| 546-756, gnl|loxAfr1|scaffold_4020 (805-349) | |
| 546-756, gnl|mm7|chr19 (58868605-58869064) | |
| 546-756, gnl|Mm7|chr19 (58868852-58869061) | |
| 546-756, gnl|monDom2|scaffold_14 (44378962-44378547) | |
| 546-756, gnl|oryCun1|scaffold_205400 (69951-70414) | |
| 546-756, gnl|panTro1|chr8 (120793453-120793897) | |
| 546-756, gnl|rheMac2|chr9 (116486861-116487300) | |
| 546-756, gnl|rn3|chr1 (265680336-265680797) | |
| 903-1074, gnl|bosTau2|chr26 (24108981-24109152) | |
| 903-1074, gnl|canFam2|chr28 (30405236-30405713) | |
| 903-1074, gnl|dasNov1|scaffold_891 (87437-86942) | |
| 903-1074, gnl|echTel1|scaffold_321247 (39373-38849) | |
| 903-1074, gnl|hg17|chr10 (118610269-118610722) | |
| 903-1074, gnl|Hg17|chr10 (118610293-118610464) | |
| 903-1074, gnl|loxAfr1|scaffold_241 (1970-2453) | |
| 903-1074, gnl|mm7|chr19 (58877306-58877796) | |
| 903-1074, gnl|Mm7|chr19 (58877359-58877530) | |
| 903-1074, gnl|monDom2|scaffold_14 (44376700-44376261) | |
| 903-1074, gnl|oryCun1|scaffold_205400 (75399-75877) | |
| 903-1074, gnl|panTro1|chr8 (120797998-120798451) | |
| 903-1074, gnl|rheMac2|chr9 (116491100-116491553) | |
| 903-1074, gnl|rn3|chr1 (265686908-265687387) | |
| 1129-1248, gnl|bosTau2|chr26 (24118767-24118886) | |
| 1129-1248, gnl|canFam2|chr28 (30413180-30413335) | |
| 1129-1248, gnl|dasNov1|scaffold_14920 (32242-32086) | |
| 1129-1248, gnl|echTel1|scaffold_292919 (9613-9766) | |
| 1129-1248, gnl|galGal2|chr6 (28023565-28023744) | |
| 1129-1248, gnl|hg17|chr10 (118623545-118623710) | |
| 1129-1248, gnl|Hg17|chr10 (118623574-118623693) | |
| 1129-1248, gnl|loxAfr1|scaffold_241 (14680-14840) | |
| 1129-1248, gnl|mm7|chr19 (58884975-58885133) | |
| 1129-1248, gnl|Mm7|chr19 (58884997-58885116) | |
| 1129-1248, gnl|monDom2|scaffold_14 (44365236-44365070) | |
| 1129-1248, gnl|oryCun1|scaffold_205400 (88143-88303) | |
| 1129-1248, gnl|panTro1|chr8 (120811354-120811519) | |
| 1129-1248, gnl|rheMac2|chr9 (116506011-116506176) | |
| 1129-1248, gnl|rn3|chr1 (265693088-265693246) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| pgl (0.118483) |