Non-Coding RNA Search

Ss1.1-Mixn-0016n15.5

Sequence:


               
               CGGGCTGTCCTTTGAGCTGTGGCAGCCAGCTCTGTTCGGAGGGTGTCTAAGATGAGACCA
ATGGCCTGCTCACCTTGGGGCATGTGGGCACAGGCGAGCGGTCAGGACACCCCTTCGCAG
CCTCGGGCCGTGTCTGTCACCCACAGCAGGGACACTGCCCGGCTCGCAGGTCTCCGATGA
CCAGCAGATGTGCTGTGGCCCCCGCGGGAGCGCCTGACCTGTGGCGGGACCTCAGCGGTT
GCTGAATCTTTGGCGGATAAAATTAAGGTGCTCTGTGCTTGTTTGTTCTGCTCAGATTAC
CCGAAAATTCAGGCTGAATTCCGAAGGCAAGCTCGAACAGACAGTCTCCATGGCAACCAC
TACCCAGCCCATGACTCAGCACCTGCACGTCACCTACAAGAAGGTGACCCCGTGACCCAG
GTAGAGCTTCGTCCCGGGCGGGGCCTGGCCTGCGTCGTGACACTTGAGCTCCTCAGCAGA
TGCCGTGGCAGGTGTGGGTGTGGCCAGGGTCACCGTGGGTTCAGGAGTGTGGCCACGTGT
TCCTGTAATGGCATATAGAAAAACCAAATAAAAGGCCTTTATTTTTAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGGGCTGTCCTTTGAGCTGTGGCAGCCAGCTCTGTTCGGAGGGTGTCTAAGATGAGACCA
ATGGCCTGCTCACCTTGGGGCATGTGGGCACAGGCGAGCGGTCAGGACACCCCTTCGCAG
CCTCGGGCCGTGTCTGTCACCCACAGCAGGGACACTGCCCGGCTCGCAGGTCTCCGATGA
CCAGCAGATGTGCTGTGGCCCCCGCGGGAGCGCCTGACCTGTGGCGGGACCTCAGCGGTT
GCTGAATCTTTGGCGGATAAAATTAAGGTGCTCTGTGCTTGTTTGTTCTGCTCAGATTAC
CCGAAAATTCAGGCTGAATTCCGAAGGCAAGCTCGAACAGACAGTCTCCATGGCAACCAC
TACCCAGCCCATGACTCAGCACCTGCACGTCACCTACAAGAAGGTGACCCCGTGACCCAG
GTAGAGCTTCGTCCCGGGCGGGGCCTGGCCTGCGTCGTGACACTTGAGCTCCTCAGCAGA
TGCCGTGGCAGGTGTGGGTGTGGCCAGGGTCACCGTGGGTTCAGGAGTGTGGCCACGTGT
TCCTGTAATGGCATATAGAAAAACCAAATAAAAGGCCTTTATTTTTAA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               86-438, gnl|bosTau2|chr16 (43962389-43962739)
               

               
               86-438, gnl|Hg17|chr2 (242244307-242243933)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               86-438, gnl|bosTau2|chr16 (43962389-43962739)
               

               
               86-438, gnl|Hg17|chr2 (242244307-242243933)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               cty (0.10408)
               

               
               jej (0.0989218)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.10408)
               

               
               jej (0.0989218)

	86-438, gnl\|bosTau2\|chr16 (43962389-43962739)
	86-438, gnl\|Hg17\|chr2 (242244307-242243933)