Ss1.1-Mixn-0016o23.5
|
TAGCCAAGATATACAAAGATCTTCAGAAGCTCTCTCGCCTCTTCAAAGACCAGCTGGTGT
ATCCTCTTCTGGCCTTTACCCGACAAGCACTGAACCTGCCAGATGTGTTTGGGTTGGTGG
TCCTCCCATTGGAGCTGAAGCTACGGATCTTCCGCCTTTTGGATGTTCGTTCTGTGCTGT
CTTTGTCTGCAGTTTGTCGTGACCTCTATATTGCTTCAAATGACCAACTTCTGTGGAGGT
GTTTATATCTACGGGATTTTCGAGATGGTACTGTCAGAGGTCGAGACACAGATTGGAAAG
AACTGTACAAGAAGAGGCACAAACAAAGAAAAGAAGCTCAGAGAGGGCGGCATGTGATGT
TCCTGCCGTCGTCACCCCACCCCATTCCATTCTACCCCAACCCCTTGCACCCCAGGCCTT
TTCCTCCCAGTTCTCTCCTTCCTCCAGGAATTATTGGTGGTGAATACGATGAGAGAATAA
CCCTTCCCTATGTTGGGGACCCAATCAATTCACTCATCCCGGGGCCTGGAGAGACACCCA
GCCAGTTCCCTCCACTCCGACCACGTTTTGATCCAATCGGCCCTCTTCCAGGACCTAATC
CCATCTTGCCAGGGCGAGGTGGCCCCAATGACAGATTCCCCTTAAGGCCCAGCAGGGGTC
GGCCCACTGACAGCCGGCTACCTTTCATGTGACTGATTTTAAGTTCACTCTGGAGCTTAG
TTGGTTTTGTTTTTTAAAAAACTATAGATGTCATCTTGTTGGGGTGCTACCTCTAGTGTT
TTCTGGTTGTGGTGGTGAGAAATGCCCTCACAGAGCCTTTTGGTAGATCATTTAAAGCTC
CAGGGCTGGTGCGGCCCCAAGGTTACTGCATGACGGGGTTGGCCTTGGGAGTAGTGGGTT
ACTGACCTCCCCTCTCAGTTACCCTCCAGAATGAAAGTTGGTCACTGATAATGTTCTACA
AGAGAATAAAAAAAATTAAGTGTAAATTAAAAAAAAAAAAAAAAAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TAGCCAAGATATACAAAGATCTTCAGAAGCTCTCTCGCCTCTTCAAAGACCAGCTGGTGT
ATCCTCTTCTGGCCTTTACCCGACAAGCACTGAACCTGCCAGATGTGTTTGGGTTGGTGG
TCCTCCCATTGGAGCTGAAGCTACGGATCTTCCGCCTTTTGGATGTTCGTTCTGTGCTGT
CTTTGTCTGCAGTTTGTCGTGACCTCTATATTGCTTCAAATGACCAACTTCTGTGGAGGT
GTTTATATCTACGGGATTTTCGAGATGGTACTGTCAGAGGTCGAGACACAGATTGGAAAG
AACTGTACAAGAAGAGGCACAAACAAAGAAAAGAAGCTCAGAGAGGGCGGCATGTGATGT
TCCTGCCGTCGTCACCCCACCCCATTCCATTCTACCCCAACCCCTTGCACCCCAGGCCTT
TTCCTCCCAGTTCTCTCCTTCCTCCAGGAATTATTGGTGGTGAATACGATGAGAGAATAA
CCCTTCCCTATGTTGGGGACCCAATCAATTCACTCATCCCGGGGCCTGGAGAGACACCCA
GCCAGTTCCCTCCACTCCGACCACGTTTTGATCCAATCGGCCCTCTTCCAGGACCTAATC
CCATCTTGCCAGGGCGAGGTGGCCCCAATGACAGATTCCCCTTAAGGCCCAGCAGGGGTC
GGCCCACTGACAGCCGGCTACCTTTCATGTGACTGATTTTAAGTTCACTCTGGAGCTTAG
TTGGTTTTGTTTTTTAAAAAACTATAGATGTCATCTTGTTGGGGTGCTACCTCTAGTGTT
TTCTGGTTGTGGTGGTGAGAAATGCCCTCACAGAGCCTTTTGGTAGATCATTTAAAGCTC
CAGGGCTGGTGCGGCCCCAAGGTTACTGCATGACGGGGTTGGCCTTGGGAGTAGTGGGTT
ACTGACCTCCCCTCTCAGTTACCCTCCAGAATGAAAGTTGGTCACTGATAATGTTCTACA
AGAGAATAAAAAAAATTAAGTGTAAATTAAAAAAAAAAAAAAAAAAAA
|
|
74-267, gnl|bosTau2|chr5 (42460426-42460233) |
|
74-267, gnl|canFam2|chr10 (34056612-34056387) |
|
74-267, gnl|dasNov1|scaffold_6430 (11852-11624) |
|
74-267, gnl|echTel1|scaffold_286500 (33643-33424) |
|
74-267, gnl|galGal2|chr1 (49945995-49945757) |
|
74-267, gnl|hg17|chr22 (31213598-31213829) |
|
74-267, gnl|Hg17|chr22 (31213632-31213825) |
|
74-267, gnl|loxAfr1|scaffold_23143 (22655-22422) |
|
74-267, gnl|mm7|chr10 (85602591-85602817) |
|
74-267, gnl|Mm7|chr10 (85602620-85602813) |
|
74-267, gnl|monDom2|scaffold_34 (5665118-5664885) |
|
74-267, gnl|oryCun1|scaffold_214827 (99563-99335) |
|
74-267, gnl|panTro1|chr23_random (9462274-9462505) |
|
74-267, gnl|rheMac2|chr10 (76412949-76413180) |
|
74-267, gnl|rn3|chr7 (19964162-19963935) |
|
74-267, gnl|xenTro1|scaffold_332 (815494-815268) |
| |
|
792-986, gnl|bosTau2|chr11 (54069577-54069776) |
|
792-986, gnl|Hg17|chr22 (31219174-31219367) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
74-267, gnl|bosTau2|chr5 (42460426-42460233) |
|
74-267, gnl|canFam2|chr10 (34056612-34056387) |
|
74-267, gnl|dasNov1|scaffold_6430 (11852-11624) |
|
74-267, gnl|echTel1|scaffold_286500 (33643-33424) |
|
74-267, gnl|galGal2|chr1 (49945995-49945757) |
|
74-267, gnl|hg17|chr22 (31213598-31213829) |
|
74-267, gnl|Hg17|chr22 (31213632-31213825) |
|
74-267, gnl|loxAfr1|scaffold_23143 (22655-22422) |
|
74-267, gnl|mm7|chr10 (85602591-85602817) |
|
74-267, gnl|Mm7|chr10 (85602620-85602813) |
|
74-267, gnl|monDom2|scaffold_34 (5665118-5664885) |
|
74-267, gnl|oryCun1|scaffold_214827 (99563-99335) |
|
74-267, gnl|panTro1|chr23_random (9462274-9462505) |
|
74-267, gnl|rheMac2|chr10 (76412949-76413180) |
|
74-267, gnl|rn3|chr7 (19964162-19963935) |
|
74-267, gnl|xenTro1|scaffold_332 (815494-815268) |
| |
|
792-986, gnl|bosTau2|chr11 (54069577-54069776) |
|
792-986, gnl|Hg17|chr22 (31219174-31219367) |
|
cly (0.241284) |
|
fcc (0.197785) |
|
eye (0.170503) |
|
nco (0.161734) |
|
hyp (0.142837) |
|
hlv (0.139256) |
|
nmm (0.132802) |
|
eep (0.122564) |
|
cty (0.10408) |
|
cly (0.241284) |
|
fcc (0.197785) |
|
eye (0.170503) |
|
nco (0.161734) |
|
hyp (0.142837) |
|
hlv (0.139256) |
|
nmm (0.132802) |
|
eep (0.122564) |
|
cty (0.10408) |
