Non-Coding RNA Search

Ss1.1-Mixn-0017b13.5

Sequence:


               
               GCCAGCTTCACTGTGTCCTCCACTGGCCCCGCAGCACTGTGGCTCCTGTGGGGGCTGTCA
ACACGAGGCTGAGAGCCACAGGCAGCTGGGAGACTCACACGGAGTTTCTGGGCGTCGGGA
AGACACCCCTGGTTCCACGAGGCTGAGCCCACACGCACGGCGCGATAGGAGGAGTCTCGG
AGCACTGCATCTGGTTTCGGGTTTTATTTTAGAATGTATAAAATTCCAGTGTCACCCGTA
TTCATGAGCCTTTACACATGTTTGCATATTATCTCCAAATTCCAAAGTTAAGGCCAAGGG
ATGGATCGCAGCTATGGACACAGACGACGTGGAAGACATTCGACAGGGAGGGAACGGACA
CGCACGCCGGTCCCGCCAGGGCCCTGCCCGCAGCGGCGGAGGCCGCAGGAGACAGGCCCC
GGGCACAGTCATCTCGGGATGCTTAACGACACCCAGCGACGGAAGTGGGGACCCCAAACG
GCTCAGGAAGGGGAGCCTGCGTTTATGACATTTAGCAATAAGTGCACATGTGCAAAACCT
ATTGTGAGAATTAAACATTTCCCTTGGGCAGCGGGCAGGGCTGGATGCTGCAGAAGAGAC
AGAGGGAGGAGCAGGTGTGGGCAGGCGCAGGGAAGGCTCGGGACTCGTGCACGAGGAAGA
GGGCGTCTTTCTCTCTCGTCAACTCTACCCAGTTCGGGGCGGCCCGGCCCGCTGAGCGGA
AGCAACGCCCTTTCCTTCTACCCCGTTTATGGGGCCTACACACGGGCACACGTAAGGCTG
CTGGGGCTCCCGGGCCCTTGCAGAGGCAGCCGCAGTCAGGCTCGGGGTCAGCGAGTCTCG
GTCCCACTCCGGAGCTGCAGAGCTGAAGGCCTCCAAGCTCTTTTCTGAGCATGAGAAACC
CCGAAGGGTGGGGCGTGGGCGCCCAGGGCACAAGGCGGCTTCTCTGGGAAGTTGGTACCT
GGGTGATACTGAGAACTGGAGAGTGGCCCAGTCACTCGCGGTGCAGAGACAGGGACCCAG
ACGGCCAGAGCTGAGGGCCTGTCCTTGGTTTCCACGCCACACGACACA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCCAGCTTCACTGTGTCCTCCACTGGCCCCGCAGCACTGTGGCTCCTGTGGGGGCTGTCA
ACACGAGGCTGAGAGCCACAGGCAGCTGGGAGACTCACACGGAGTTTCTGGGCGTCGGGA
AGACACCCCTGGTTCCACGAGGCTGAGCCCACACGCACGGCGCGATAGGAGGAGTCTCGG
AGCACTGCATCTGGTTTCGGGTTTTATTTTAGAATGTATAAAATTCCAGTGTCACCCGTA
TTCATGAGCCTTTACACATGTTTGCATATTATCTCCAAATTCCAAAGTTAAGGCCAAGGG
ATGGATCGCAGCTATGGACACAGACGACGTGGAAGACATTCGACAGGGAGGGAACGGACA
CGCACGCCGGTCCCGCCAGGGCCCTGCCCGCAGCGGCGGAGGCCGCAGGAGACAGGCCCC
GGGCACAGTCATCTCGGGATGCTTAACGACACCCAGCGACGGAAGTGGGGACCCCAAACG
GCTCAGGAAGGGGAGCCTGCGTTTATGACATTTAGCAATAAGTGCACATGTGCAAAACCT
ATTGTGAGAATTAAACATTTCCCTTGGGCAGCGGGCAGGGCTGGATGCTGCAGAAGAGAC
AGAGGGAGGAGCAGGTGTGGGCAGGCGCAGGGAAGGCTCGGGACTCGTGCACGAGGAAGA
GGGCGTCTTTCTCTCTCGTCAACTCTACCCAGTTCGGGGCGGCCCGGCCCGCTGAGCGGA
AGCAACGCCCTTTCCTTCTACCCCGTTTATGGGGCCTACACACGGGCACACGTAAGGCTG
CTGGGGCTCCCGGGCCCTTGCAGAGGCAGCCGCAGTCAGGCTCGGGGTCAGCGAGTCTCG
GTCCCACTCCGGAGCTGCAGAGCTGAAGGCCTCCAAGCTCTTTTCTGAGCATGAGAAACC
CCGAAGGGTGGGGCGTGGGCGCCCAGGGCACAAGGCGGCTTCTCTGGGAAGTTGGTACCT
GGGTGATACTGAGAACTGGAGAGTGGCCCAGTCACTCGCGGTGCAGAGACAGGGACCCAG
ACGGCCAGAGCTGAGGGCCTGTCCTTGGTTTCCACGCCACACGACACA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               121-350, gnl|bosTau2|chr3 (82783649-82783425)
               

               
               121-350, gnl|Hg17|chr2 (241886622-241886856)
               

               
               121-350, gnl|Mm7|chr1 (93313724-93313908)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               121-350, gnl|bosTau2|chr3 (82783649-82783425)
               

               
               121-350, gnl|Hg17|chr2 (241886622-241886856)
               

               
               121-350, gnl|Mm7|chr1 (93313724-93313908)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

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               eje (0.0988338)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eje (0.0988338)

	121-350, gnl\|bosTau2\|chr3 (82783649-82783425)
	121-350, gnl\|Hg17\|chr2 (241886622-241886856)
	121-350, gnl\|Mm7\|chr1 (93313724-93313908)