Non-Coding RNA Search

Ss1.1-Mixn-0017d05.5

Sequence:


               
               TTTTTTTTTGAGTTTGTAAAATGTTTATTTTAGTGAAATACAAGAAGGTGAGCAATTACC
AGTTTCCGTTTAACCTGACTTAGAAAAATAAAAGTCCCATGCGCATATTCTTTATCTAAT
ATTTTGTATACTGCTGTAAAATTTAAAGCAGAATCGAGTGTTCCCTTTTATCTGCCAAAG
AAGTCGTTATGACAATTCCAGGTATTGTCTGCCATCTCCAAGAAAGCCCTTCCGAGAAAG
GCTAGGTCCCAAAGGTTCGGGTCCAGAGGTCCGTCCCTCGGTCCCCACCGGATCGGGTCC
CTAACGCTGCAGGCAGTTGCCTAAGGCGTTCTCCGCCTCCAGCCACGCTGCAATCCTCGC
TCCAGACACTGCGGCAGGTTCTCTCCGTGCCCCGGAGGAGGTCTCTCCAAACCTGGCCAG
CTCTTTCTCCTGCCCCCGGGGATCCAGACGCCCTGGCAGCTCCCGGGCTCCAGGAGCGAG
AATGCGATGCTGCCTCCACTCTCAATCGCCCCAAGTTTCTTCCCAGAGGGCCTGCTCCAA
GTTTGCTCCCGCCGCTGGTGAGCGGCAGCGCGCCCCGTCGGCAGAGGGGGGCGGCGGGGG
GCGCATGCGGAGGGCGGGGAGGGGGAGGGCGCGCGGTGGGGGGGGGGGACCAGATGGGGG
AGAAGGGGGAGGAGCANGAGCGCG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTTTTTTGAGTTTGTAAAATGTTTATTTTAGTGAAATACAAGAAGGTGAGCAATTACC
AGTTTCCGTTTAACCTGACTTAGAAAAATAAAAGTCCCATGCGCATATTCTTTATCTAAT
ATTTTGTATACTGCTGTAAAATTTAAAGCAGAATCGAGTGTTCCCTTTTATCTGCCAAAG
AAGTCGTTATGACAATTCCAGGTATTGTCTGCCATCTCCAAGAAAGCCCTTCCGAGAAAG
GCTAGGTCCCAAAGGTTCGGGTCCAGAGGTCCGTCCCTCGGTCCCCACCGGATCGGGTCC
CTAACGCTGCAGGCAGTTGCCTAAGGCGTTCTCCGCCTCCAGCCACGCTGCAATCCTCGC
TCCAGACACTGCGGCAGGTTCTCTCCGTGCCCCGGAGGAGGTCTCTCCAAACCTGGCCAG
CTCTTTCTCCTGCCCCCGGGGATCCAGACGCCCTGGCAGCTCCCGGGCTCCAGGAGCGAG
AATGCGATGCTGCCTCCACTCTCAATCGCCCCAAGTTTCTTCCCAGAGGGCCTGCTCCAA
GTTTGCTCCCGCCGCTGGTGAGCGGCAGCGCGCCCCGTCGGCAGAGGGGGGCGGCGGGGG
GCGCATGCGGAGGGCGGGGAGGGGGAGGGCGCGCGGTGGGGGGGGGGGACCAGATGGGGG
AGAAGGGGGAGGAGCANGAGCGCG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               23-671, gnl|bosTau2|chr6 (30070817-30071450)
               

               
               23-671, gnl|Hg17|chr4 (38489763-38489098)
               

               
               23-671, gnl|Mm7|chr5 (64159541-64158963)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               23-671, gnl|bosTau2|chr6 (30070817-30071450)
               

               
               23-671, gnl|Hg17|chr4 (38489763-38489098)
               

               
               23-671, gnl|Mm7|chr5 (64159541-64158963)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               nlu (0.191681)
               

               
               pla (0.133672)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nlu (0.191681)
               

               
               pla (0.133672)

	23-671, gnl\|bosTau2\|chr6 (30070817-30071450)
	23-671, gnl\|Hg17\|chr4 (38489763-38489098)
	23-671, gnl\|Mm7\|chr5 (64159541-64158963)