Ss1.1-Mixn-0017d23.5.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCTTTCTACCTGGAGGGTCTGGACCTCAGCCCTAAAGAGATTGTCCAGAAGGTCCGAAAG GGTCAGCGGCCTTACTTCCGGCCAAGTATTGACCGGACCCAACTGAATGAAGAACTAGTT ATGCTGATGGAGCGATGTTGGGCCCAGGACCCAGCCGAGCGGCCGGACTTGGGCCAGATT AAGGGCTTCATTCGCCGCTTTAACAAGGAGGGTGGCACCAGCATACTGGATAACCTCCTG TTGCGCATGGAGCAGTATGCCAACAACCTGGAGAAGCTGGTGGAGGAACGCACACAGGCC TATCTGGAGGAGAAACGCAAGGCTGAGGCTCTGCTCTACCAAATCCTACCCCATTCAGTG GCGGAGCAGTTAAAGCGGGGAGAGACTGTACAGGCCGAGGCCTTTGACAGCGTTACCATT TACTTCAGTGACATTGTTGGCTTCACAGCTTTGTCAGCGGAGAGCACCCCCATGCAGGTG GTGACACTTCTTAATGATCTGTATACCTGCTTTGATGCCATAATTGACAACTTTGACGTC TACAAGGTAGAGACGATTGGAGATGCCTACATGGTGGTATCTGGTCTCCCAGGCAGAAAT GGTCAACGCCATGCCCCGGAAATTGCTCGTATGGCCCTAGCATTACTGGATGCAGTTTCT TCCTTCCGCATCCGCCATCGACCCCACGACCAGCTGAGGCTCCGCATAGGGGTGCACACG GGGCCTGTCTGTGCTGGGGTCGTTGGCCTGAAGATGCCCCGCTATTGTCTTTTTGGAGAC ACGGTGAACACTGCTTCCCGAATGGAGTCTAACGGTCAAGCCCTGAAGATTCATGTCTCC TCTACCACCAAAGATGCCCTGGATGAGCTAGGATGCTTCCAGCTAGAGCTTCGAGGGGAT GTGGAGATGAAGGGCAAAGGAAAGATGCGAACTTACTGGCTCCTAGGAGAGCGGAAAGGA CCTGCTGGCCTCCTATAAGCCCCACTTCTTCCCAAGTCAGACAATCTCCTGCTGCTGGTA CCTGGGTGGGCAGTGGCCATCATCTCTCCATGCCAGAAAGGGACATTGTCACATGAGATG GAAATCAACATGTATAAAATCCCCACCTTATATGGAAGTTGTTGCCCTTTGCAGCTCGGC CTTGTACATATTCCTGCCCCTCTCTGGCCTAGTCCCCTTCCTCCCTACCCTCTGTAAATA TCTGTATCTAAACCAGAATATTTTGGCCAAATATAAAACAAACAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCTTTCTACCTGGAGGGTCTGGACCTCAGCCCTAAAGAGATTGTCCAGAAGGTCCGAAAG GGTCAGCGGCCTTACTTCCGGCCAAGTATTGACCGGACCCAACTGAATGAAGAACTAGTT ATGCTGATGGAGCGATGTTGGGCCCAGGACCCAGCCGAGCGGCCGGACTTGGGCCAGATT AAGGGCTTCATTCGCCGCTTTAACAAGGAGGGTGGCACCAGCATACTGGATAACCTCCTG TTGCGCATGGAGCAGTATGCCAACAACCTGGAGAAGCTGGTGGAGGAACGCACACAGGCC TATCTGGAGGAGAAACGCAAGGCTGAGGCTCTGCTCTACCAAATCCTACCCCATTCAGTG GCGGAGCAGTTAAAGCGGGGAGAGACTGTACAGGCCGAGGCCTTTGACAGCGTTACCATT TACTTCAGTGACATTGTTGGCTTCACAGCTTTGTCAGCGGAGAGCACCCCCATGCAGGTG GTGACACTTCTTAATGATCTGTATACCTGCTTTGATGCCATAATTGACAACTTTGACGTC TACAAGGTAGAGACGATTGGAGATGCCTACATGGTGGTATCTGGTCTCCCAGGCAGAAAT GGTCAACGCCATGCCCCGGAAATTGCTCGTATGGCCCTAGCATTACTGGATGCAGTTTCT TCCTTCCGCATCCGCCATCGACCCCACGACCAGCTGAGGCTCCGCATAGGGGTGCACACG GGGCCTGTCTGTGCTGGGGTCGTTGGCCTGAAGATGCCCCGCTATTGTCTTTTTGGAGAC ACGGTGAACACTGCTTCCCGAATGGAGTCTAACGGTCAAGCCCTGAAGATTCATGTCTCC TCTACCACCAAAGATGCCCTGGATGAGCTAGGATGCTTCCAGCTAGAGCTTCGAGGGGAT GTGGAGATGAAGGGCAAAGGAAAGATGCGAACTTACTGGCTCCTAGGAGAGCGGAAAGGA CCTGCTGGCCTCCTATAAGCCCCACTTCTTCCCAAGTCAGACAATCTCCTGCTGCTGGTA CCTGGGTGGGCAGTGGCCATCATCTCTCCATGCCAGAAAGGGACATTGTCACATGAGATG GAAATCAACATGTATAAAATCCCCACCTTATATGGAAGTTGTTGCCCTTTGCAGCTCGGC CTTGTACATATTCCTGCCCCTCTCTGGCCTAGTCCCCTTCCTCCCTACCCTCTGTAAATA TCTGTATCTAAACCAGAATATTTTGGCCAAATATAAAACAAACAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 39 entry(ies) | More info |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
| 204-367, gnl|bosTau2|chr3 (7927352-7927515) | |
| 204-367, gnl|canFam2|chr7 (46364523-46364335) | |
| 204-367, gnl|danRer3|chrNA (18869959-18870148) | |
| 204-367, gnl|dasNov1|scaffold_50629 (9880-10068) | |
| 204-367, gnl|echTel1|scaffold_290397 (6542-6365) | |
| 204-367, gnl|fr1|chrUn (39663615-39663435) | |
| 204-367, gnl|hg17|chr1 (150474469-150474658) | |
| 204-367, gnl|Hg17|chr1 (150474499-150474662) | |
| 204-367, gnl|loxAfr1|scaffold_2219 (59418-59604) | |
| 204-367, gnl|mm7|chr3 (90587098-90586890) | |
| 204-367, gnl|Mm7|chr3 (90587047-90586880) | |
| 204-367, gnl|monDom2|scaffold_17 (45725411-45725249) | |
| 204-367, gnl|oryCun1|scaffold_175360 (79552-79371) | |
| 204-367, gnl|panTro1|chr1 (132454164-132454353) | |
| 204-367, gnl|rheMac2|chr1 (132200711-132200900) | |
| 204-367, gnl|rn3|chr2 (182680322-182680133) | |
| 204-367, gnl|tetNig1|chrUn_random (10251061-10251238) | |
| 204-367, gnl|xenTro1|scaffold_1512 (75238-75400) | |
| 545-722, gnl|bosTau2|chr3 (7928427-7928604) | |
| 545-722, gnl|canFam2|chr7 (46363638-46363451) | |
| 545-722, gnl|danRer3|chr16 (23691764-23691577) | |
| 545-722, gnl|dasNov1|scaffold_50629 (10727-10914) | |
| 545-722, gnl|echTel1|scaffold_240573 (2321-2509) | |
| 545-722, gnl|fr1|chrUn (39662946-39662759) | |
| 545-722, gnl|hg17|chr1 (150475348-150475535) | |
| 545-722, gnl|Hg17|chr1 (150475353-150475530) | |
| 545-722, gnl|loxAfr1|scaffold_2219 (60292-60480) | |
| 545-722, gnl|mm7|chr3 (90586011-90585823) | |
| 545-722, gnl|Mm7|chr3 (90586003-90585826) | |
| 545-722, gnl|monDom2|scaffold_17 (45723812-45723625) | |
| 545-722, gnl|oryCun1|scaffold_184457 (5538-5349) | |
| 545-722, gnl|panTro1|chr1 (132455042-132455229) | |
| 545-722, gnl|rheMac2|chr1 (132201604-132201791) | |
| 545-722, gnl|rn3|chr2 (182679184-182678996) | |
| 545-722, gnl|tetNig1|chrUn_random (10251644-10251828) | |
| 545-722, gnl|xenTro1|scaffold_1361 (39892-40078) | |
| 911-1246, gnl|bosTau2|chr8 (28539509-28539846) | |
| 911-1246, gnl|Hg17|chr9 (35799375-35799710) | |
| 911-1246, gnl|Mm7|chr4 (43664725-43665052) |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 204-367, gnl|bosTau2|chr3 (7927352-7927515) | |
| 204-367, gnl|canFam2|chr7 (46364523-46364335) | |
| 204-367, gnl|danRer3|chrNA (18869959-18870148) | |
| 204-367, gnl|dasNov1|scaffold_50629 (9880-10068) | |
| 204-367, gnl|echTel1|scaffold_290397 (6542-6365) | |
| 204-367, gnl|fr1|chrUn (39663615-39663435) | |
| 204-367, gnl|hg17|chr1 (150474469-150474658) | |
| 204-367, gnl|Hg17|chr1 (150474499-150474662) | |
| 204-367, gnl|loxAfr1|scaffold_2219 (59418-59604) | |
| 204-367, gnl|mm7|chr3 (90587098-90586890) | |
| 204-367, gnl|Mm7|chr3 (90587047-90586880) | |
| 204-367, gnl|monDom2|scaffold_17 (45725411-45725249) | |
| 204-367, gnl|oryCun1|scaffold_175360 (79552-79371) | |
| 204-367, gnl|panTro1|chr1 (132454164-132454353) | |
| 204-367, gnl|rheMac2|chr1 (132200711-132200900) | |
| 204-367, gnl|rn3|chr2 (182680322-182680133) | |
| 204-367, gnl|tetNig1|chrUn_random (10251061-10251238) | |
| 204-367, gnl|xenTro1|scaffold_1512 (75238-75400) | |
| 545-722, gnl|bosTau2|chr3 (7928427-7928604) | |
| 545-722, gnl|canFam2|chr7 (46363638-46363451) | |
| 545-722, gnl|danRer3|chr16 (23691764-23691577) | |
| 545-722, gnl|dasNov1|scaffold_50629 (10727-10914) | |
| 545-722, gnl|echTel1|scaffold_240573 (2321-2509) | |
| 545-722, gnl|fr1|chrUn (39662946-39662759) | |
| 545-722, gnl|hg17|chr1 (150475348-150475535) | |
| 545-722, gnl|Hg17|chr1 (150475353-150475530) | |
| 545-722, gnl|loxAfr1|scaffold_2219 (60292-60480) | |
| 545-722, gnl|mm7|chr3 (90586011-90585823) | |
| 545-722, gnl|Mm7|chr3 (90586003-90585826) | |
| 545-722, gnl|monDom2|scaffold_17 (45723812-45723625) | |
| 545-722, gnl|oryCun1|scaffold_184457 (5538-5349) | |
| 545-722, gnl|panTro1|chr1 (132455042-132455229) | |
| 545-722, gnl|rheMac2|chr1 (132201604-132201791) | |
| 545-722, gnl|rn3|chr2 (182679184-182678996) | |
| 545-722, gnl|tetNig1|chrUn_random (10251644-10251828) | |
| 545-722, gnl|xenTro1|scaffold_1361 (39892-40078) | |
| 911-1246, gnl|bosTau2|chr8 (28539509-28539846) | |
| 911-1246, gnl|Hg17|chr9 (35799375-35799710) | |
| 911-1246, gnl|Mm7|chr4 (43664725-43665052) |
| Expressed library(ies): 7 entry(ies) | More info |
| Expressed library(ies): 7 entry(ies) | Help | Less info |
| fcc (0.39557) | |
| fty (0.17584) | |
| nco (0.161734) | |
| nca (0.136874) | |
| ese (0.126502) | |
| ecc (0.115035) | |
| jca (0.11396) |
| Expressed library(ies): 7 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fcc (0.39557) | |
| fty (0.17584) | |
| nco (0.161734) | |
| nca (0.136874) | |
| ese (0.126502) | |
| ecc (0.115035) | |
| jca (0.11396) |