Ss1.1-Mixn-0017g04.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ACGGCAACAAGTACAAGAGGCGGGCGCCCCGGGTCTCCGAGCCCCCGGCCTCCATCAGGA AAGCAGACGACGCCCCCTCCCAGCACCCCACGTCCTCTGAGAAGGAAAAGCAGCCGGGTT GGCTGCGGACCCTGGCCGGCTCCTCCAGCAAGAGCCTGGGCTGCGTCCACCCTCGCCAGC GTCTCTCCGCCTTCCGTCCCTGGTCCCCTGCCGTTTCTGCGAGCGACAAAGAGCTCTCCC CGCACCTCCCGGCCCTGATTCGAGACAGCTTTTACTCCTACAAGAGCTTCGAGGCAGGTG TGGCGCCCAACGTGGCCCTGGCACCGCCCGCCCAGCACAAGGTGAGCAGCCCGCCGTGCA CCACGGTCGTCTCCCGGGCCCCCGAGCCTCTGGCCACCTGTATCCAGCCTCGGAAGCGGA AGCTGACCTTGGACACCGCGGGAGCCTCGGAGACAC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ACGGCAACAAGTACAAGAGGCGGGCGCCCCGGGTCTCCGAGCCCCCGGCCTCCATCAGGA AAGCAGACGACGCCCCCTCCCAGCACCCCACGTCCTCTGAGAAGGAAAAGCAGCCGGGTT GGCTGCGGACCCTGGCCGGCTCCTCCAGCAAGAGCCTGGGCTGCGTCCACCCTCGCCAGC GTCTCTCCGCCTTCCGTCCCTGGTCCCCTGCCGTTTCTGCGAGCGACAAAGAGCTCTCCC CGCACCTCCCGGCCCTGATTCGAGACAGCTTTTACTCCTACAAGAGCTTCGAGGCAGGTG TGGCGCCCAACGTGGCCCTGGCACCGCCCGCCCAGCACAAGGTGAGCAGCCCGCCGTGCA CCACGGTCGTCTCCCGGGCCCCCGAGCCTCTGGCCACCTGTATCCAGCCTCGGAAGCGGA AGCTGACCTTGGACACCGCGGGAGCCTCGGAGACAC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 30 entry(ies) | More info |
| Aligned organism(s): 30 entry(ies) | Help | Less info |
| 32-152, gnl|bosTau2|chr16 (36626546-36626426) | |
| 32-152, gnl|canFam2|chr5 (60209879-60210015) | |
| 32-152, gnl|dasNov1|scaffold_132176 (3937-4073) | |
| 32-152, gnl|echTel1|scaffold_296340 (671-807) | |
| 32-152, gnl|galGal2|chr21 (1584079-1583945) | |
| 32-152, gnl|hg17|chr1 (2266576-2266715) | |
| 32-152, gnl|Hg17|chr1 (2266578-2266704) | |
| 32-152, gnl|loxAfr1|scaffold_136036 (5726-5587) | |
| 32-152, gnl|mm7|chr4 (154150503-154150367) | |
| 32-152, gnl|Mm7|chr4 (154150499-154150376) | |
| 32-152, gnl|monDom2|scaffold_239 (156014-155878) | |
| 32-152, gnl|rheMac2|chr1 (5370351-5370490) | |
| 32-152, gnl|rn3|chr5 (171971004-171970868) | |
| 265-456, gnl|bosTau2|chr16 (36625840-36625646) | |
| 265-456, gnl|canFam2|chr5 (60210796-60211097) | |
| 265-456, gnl|danRer3|chr8 (27471128-27471425) | |
| 265-456, gnl|dasNov1|scaffold_132176 (4754-5058) | |
| 265-456, gnl|echTel1|scaffold_296340 (2116-2414) | |
| 265-456, gnl|galGal2|chr21 (1582505-1582214) | |
| 265-456, gnl|hg17|chr1 (2267418-2267718) | |
| 265-456, gnl|Hg17|chr1 (2267438-2267631) | |
| 265-456, gnl|loxAfr1|scaffold_136036 (4492-4191) | |
| 265-456, gnl|mm7|chr4 (154149522-154149225) | |
| 265-456, gnl|Mm7|chr4 (154149504-154149310) | |
| 265-456, gnl|monDom2|scaffold_239 (153102-152801) | |
| 265-456, gnl|panTro1|chr1 (2172832-2173132) | |
| 265-456, gnl|rheMac2|chr1 (5371204-5371504) | |
| 265-456, gnl|rn3|chr5 (171970197-171969900) | |
| 265-456, gnl|tetNig1|chrUn_random (96566073-96566367) | |
| 265-456, gnl|xenTro1|scaffold_177 (1453985-1453701) |
| Aligned organism(s): 30 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 32-152, gnl|bosTau2|chr16 (36626546-36626426) | |
| 32-152, gnl|canFam2|chr5 (60209879-60210015) | |
| 32-152, gnl|dasNov1|scaffold_132176 (3937-4073) | |
| 32-152, gnl|echTel1|scaffold_296340 (671-807) | |
| 32-152, gnl|galGal2|chr21 (1584079-1583945) | |
| 32-152, gnl|hg17|chr1 (2266576-2266715) | |
| 32-152, gnl|Hg17|chr1 (2266578-2266704) | |
| 32-152, gnl|loxAfr1|scaffold_136036 (5726-5587) | |
| 32-152, gnl|mm7|chr4 (154150503-154150367) | |
| 32-152, gnl|Mm7|chr4 (154150499-154150376) | |
| 32-152, gnl|monDom2|scaffold_239 (156014-155878) | |
| 32-152, gnl|rheMac2|chr1 (5370351-5370490) | |
| 32-152, gnl|rn3|chr5 (171971004-171970868) | |
| 265-456, gnl|bosTau2|chr16 (36625840-36625646) | |
| 265-456, gnl|canFam2|chr5 (60210796-60211097) | |
| 265-456, gnl|danRer3|chr8 (27471128-27471425) | |
| 265-456, gnl|dasNov1|scaffold_132176 (4754-5058) | |
| 265-456, gnl|echTel1|scaffold_296340 (2116-2414) | |
| 265-456, gnl|galGal2|chr21 (1582505-1582214) | |
| 265-456, gnl|hg17|chr1 (2267418-2267718) | |
| 265-456, gnl|Hg17|chr1 (2267438-2267631) | |
| 265-456, gnl|loxAfr1|scaffold_136036 (4492-4191) | |
| 265-456, gnl|mm7|chr4 (154149522-154149225) | |
| 265-456, gnl|Mm7|chr4 (154149504-154149310) | |
| 265-456, gnl|monDom2|scaffold_239 (153102-152801) | |
| 265-456, gnl|panTro1|chr1 (2172832-2173132) | |
| 265-456, gnl|rheMac2|chr1 (5371204-5371504) | |
| 265-456, gnl|rn3|chr5 (171970197-171969900) | |
| 265-456, gnl|tetNig1|chrUn_random (96566073-96566367) | |
| 265-456, gnl|xenTro1|scaffold_177 (1453985-1453701) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| pla (0.133672) |