Non-Coding RNA Search

Ss1.1-Mixn-0017j22.5

Sequence:


               
               TCCATGAACCAGCGCCGCGTGGATTTCTACCTTGCGTCCATTGAGGACATGCTGGTGGCC
GTCGGTGGCCGGAATGAGAACGGAGCTCTCTCTTCGGTAGAGACCTACAGTCCCAAGACG
GACTCCTGGTCCTACGTGGCCGGCTTGCCAAGGTTCACGTATGGCCACGCGGGCACCATC
TACAAAGACTTCGTGTACATCTCGGGGGGCCACGACTACCAGATCGGGCCCTACCGCAAG
AACCTGCTGTGCTACGACCACCGGACGGACGTGTGGGAGGAGCGGCGGCCCATGCCCACG
GCGCGCGGCTGGCACAGCATGTGCAGCCTGGGGGACAGCATCTACTCCATCGGCGGCAGC
GACGACAGCATCGAGTCCATGGAGCGCTTCGACGTGCTGGGCGTGGAGGCCTACAGCCCG
CAGTGCAACCAGTGGACCCGCGTGGCGCCGCTGCTGCAGGCCAACAGCGAGTCGGGGGTG
GCGGTGTGGCAGGGCCGCATCTACATCCTGGGCGGCTACAGCTGGGAGAACACGGCCTTC
TCCAAGACCGTGCAGGTCTACGACCGCGAGAAGGACAAGTGGAGCAAGGGCACCGACCTG
CCCAAGGCCATCGCCGGCGTGTCCGCCTGCGTCTGCGCCCTGACGCCACGCCTGGAGGAC
AAGAAGAAGAAGGGCAAAGGCAAGCGGCCCCAGGACCGCGGCCAGTGACCGCCCCCGGGC
GGAGTCCTGGCACCGTTGTGTACGACTTCGCAGCTTTTTTTTACTTTTATGATTTTTGGC
ATTTCTGTGACACCACAGTGACCGATTAAATCTTCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCCATGAACCAGCGCCGCGTGGATTTCTACCTTGCGTCCATTGAGGACATGCTGGTGGCC
GTCGGTGGCCGGAATGAGAACGGAGCTCTCTCTTCGGTAGAGACCTACAGTCCCAAGACG
GACTCCTGGTCCTACGTGGCCGGCTTGCCAAGGTTCACGTATGGCCACGCGGGCACCATC
TACAAAGACTTCGTGTACATCTCGGGGGGCCACGACTACCAGATCGGGCCCTACCGCAAG
AACCTGCTGTGCTACGACCACCGGACGGACGTGTGGGAGGAGCGGCGGCCCATGCCCACG
GCGCGCGGCTGGCACAGCATGTGCAGCCTGGGGGACAGCATCTACTCCATCGGCGGCAGC
GACGACAGCATCGAGTCCATGGAGCGCTTCGACGTGCTGGGCGTGGAGGCCTACAGCCCG
CAGTGCAACCAGTGGACCCGCGTGGCGCCGCTGCTGCAGGCCAACAGCGAGTCGGGGGTG
GCGGTGTGGCAGGGCCGCATCTACATCCTGGGCGGCTACAGCTGGGAGAACACGGCCTTC
TCCAAGACCGTGCAGGTCTACGACCGCGAGAAGGACAAGTGGAGCAAGGGCACCGACCTG
CCCAAGGCCATCGCCGGCGTGTCCGCCTGCGTCTGCGCCCTGACGCCACGCCTGGAGGAC
AAGAAGAAGAAGGGCAAAGGCAAGCGGCCCCAGGACCGCGGCCAGTGACCGCCCCCGGGC
GGAGTCCTGGCACCGTTGTGTACGACTTCGCAGCTTTTTTTTACTTTTATGATTTTTGGC
ATTTCTGTGACACCACAGTGACCGATTAAATCTTCT

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|18676460|dbj|BAB84882.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|18676460|dbj|BAB84882.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               151-710, gnl|bosTau2|chr18 (12040342-12039783)
               

               
               151-710, gnl|Hg17|chr16 (83252683-83253242)
               

               
               151-710, gnl|Mm7|chr8 (118511998-118512554)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               151-710, gnl|bosTau2|chr18 (12040342-12039783)
               

               
               151-710, gnl|Hg17|chr16 (83252683-83253242)
               

               
               151-710, gnl|Mm7|chr8 (118511998-118512554)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               mcp (0.170648)
               

               
               ecc (0.115035)
               

               
               nbm (0.0993246)
               

               
               jej (0.0989218)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mcp (0.170648)
               

               
               ecc (0.115035)
               

               
               nbm (0.0993246)
               

               
               jej (0.0989218)

	151-710, gnl\|bosTau2\|chr18 (12040342-12039783)
	151-710, gnl\|Hg17\|chr16 (83252683-83253242)
	151-710, gnl\|Mm7\|chr8 (118511998-118512554)