Non-Coding RNA Search

Ss1.1-Mixn-0017n05.5

Sequence:


               
               GGGGGCAGGGTAGAGGCCGCGAGGCAGCCCAGAGAGGGCAGCTGGGGTCATCCACCCTGC
TGCCTGATGTGTCTCTTCTGGGCTTGGGTTTCGCAGCCAGGTTAAGGGGATAGGGTCCTT
GCCCTCCCGGCCTCGCAGGGCTGACCGTGGGAGGTGGAGGGGCGTGGGGTGGGGCGCAGC
CCTCTCGGGGGTGGAATGCCTGGCACATTGGGCCCAGAGGATCCCCACTCCCAGGGAGGA
CACCCTCCCGTGAGAGACCCACACCAGGCTCTGTGCCCCTGCTACTCTCCCCTGCAACCA
CACACATGCACACAGGCACAGGCACACTCGCTCCCCCGCACACGTGTCACCACACCATCG
CCCGTAGGCCTGTGGGGACCGGTGGCCGGGGGCTGCCCCCTGATGCCCCACCCTGTATGC
CCAGGGGACCTGGGGGGCGCCCCACTCACCGTCCACTGCAGGCACACCAGCATGTATGCC
AGATTTTCCACTTCGAAGTTCACCAGCGTGAGCAGAGGCGGGCCGACTGCAAGGAGGGGC
GTGAAGGGGCTCAGGAACAGGGTGGGGGCGCGAACGGGTGGCTGGGCAGCGGGAGCCTGG
GGAGTGGGGGCTCGTTCCTCCAGGAATGCCCGGTGGGAGTTGGTGCAGGTCCCATCCGGC
TGGGACAATTGTGCATCACCCACAAGCCTGGTCCTCACGCCTTCCCTCAGTGTCTGAGCC
TCTCCAGGCTGGTCCTTGGCAGGCAGGGGCCACCTTATCCACCTGCACCCGTTTTTTTTC
CTTTTCTTCTCTGGCCACTCCATGGCATATGGAATTTCTGGGCCATCAGCTGCAGCTGCA
ACCTATGCCAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGGGGCAGGGTAGAGGCCGCGAGGCAGCCCAGAGAGGGCAGCTGGGGTCATCCACCCTGC
TGCCTGATGTGTCTCTTCTGGGCTTGGGTTTCGCAGCCAGGTTAAGGGGATAGGGTCCTT
GCCCTCCCGGCCTCGCAGGGCTGACCGTGGGAGGTGGAGGGGCGTGGGGTGGGGCGCAGC
CCTCTCGGGGGTGGAATGCCTGGCACATTGGGCCCAGAGGATCCCCACTCCCAGGGAGGA
CACCCTCCCGTGAGAGACCCACACCAGGCTCTGTGCCCCTGCTACTCTCCCCTGCAACCA
CACACATGCACACAGGCACAGGCACACTCGCTCCCCCGCACACGTGTCACCACACCATCG
CCCGTAGGCCTGTGGGGACCGGTGGCCGGGGGCTGCCCCCTGATGCCCCACCCTGTATGC
CCAGGGGACCTGGGGGGCGCCCCACTCACCGTCCACTGCAGGCACACCAGCATGTATGCC
AGATTTTCCACTTCGAAGTTCACCAGCGTGAGCAGAGGCGGGCCGACTGCAAGGAGGGGC
GTGAAGGGGCTCAGGAACAGGGTGGGGGCGCGAACGGGTGGCTGGGCAGCGGGAGCCTGG
GGAGTGGGGGCTCGTTCCTCCAGGAATGCCCGGTGGGAGTTGGTGCAGGTCCCATCCGGC
TGGGACAATTGTGCATCACCCACAAGCCTGGTCCTCACGCCTTCCCTCAGTGTCTGAGCC
TCTCCAGGCTGGTCCTTGGCAGGCAGGGGCCACCTTATCCACCTGCACCCGTTTTTTTTC
CTTTTCTTCTCTGGCCACTCCATGGCATATGGAATTTCTGGGCCATCAGCTGCAGCTGCA
ACCTATGCCAAA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               413-738, gnl|bosTau2|chr29 (31610298-31609988)
               

               
               413-738, gnl|Hg17|chr11 (61401525-61401815)
               

               
               413-738, gnl|Mm7|chr19 (9735343-9735055)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               413-738, gnl|bosTau2|chr29 (31610298-31609988)
               

               
               413-738, gnl|Hg17|chr11 (61401525-61401815)
               

               
               413-738, gnl|Mm7|chr19 (9735343-9735055)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pla (0.133672)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.133672)

	413-738, gnl\|bosTau2\|chr29 (31610298-31609988)
	413-738, gnl\|Hg17\|chr11 (61401525-61401815)
	413-738, gnl\|Mm7\|chr19 (9735343-9735055)