Non-Coding RNA Search

Ss1.1-Mixn-0018k01.5

Sequence:


               
               TTTTTCGGATGTGAAACTTGAAAGGTTTTATTTCCTAACTACAGGTAAGAGGCGGGATAT
CTGGCGCCCACACAGCCTGAGCGTACCCGGGCTGGAGGCGGCAGGAGGGCAGGCAAGGAG
AGGGGGCTTTGGGGTCGGCTTCCGGGGTGAGAGGCGCCTGCCCCCTGAGCCCTCACTGGC
CCTTCTTGTGGGCGTTCTTGACGATGGCGTTTTTGAACAGCGTGACCAGGGGCGTCTGGC
TCTTCTCGGAGGTCATGAAGCCGCCGTAGCGCTTGTCCTTGGGCGGGCTGCCCCAGCGGA
AGTGCTCCATCTTATAGGGCCCTTCGTCCTTCTTCTCGGCCGCCTCGGCCTCGGCCACCA
GCCCGTACTCCAGCTCGGCCCGGGCGGCCGCGCCCTCGGCCGGGGCCTCGGGGTCCCGTG
CCGGCTCGGGGGGCGCCCCGGCCAGCTCCCTCCTGAACTCGAGGGGGAAGGCCTCGGCCA
ACTCGTCCTCGGCGCCGTTGGGATACACCTTCACCGGGCGCCGCTTCTTGCCCACGGGCT
TGCCCCAGCGGAAGTGCTCCATGGAGTAGGAGCGCTTGTCCTGGCGCGGGCCCGGCGCGA
CGCCATCTCCGCGGGGCCCGGGGCCTTCGCCCGCCGCCACCTCCTCCTCCTCGCGCTTCT
GGCCCGCGCCGCCGCCACCGCCACCGCCGCCGCTGCTGCTGCCATTCCGGCGGCCGAAGC
GGTCCCAGCGGAAGTGGCCCATGACGTACTTCCGGGGGTTCTCGGTCAGCGGTTGCGCGT
CGCCGTTGCCGGGAAACACGGGCGTCTCCGCAGAGAGATCTGGTTTGCAGGCCCGGATGC
ACGCCAGCAAGTTACTTTCCGTGGAGAGGTCCTGACACTGGCTGCTTTCCAGGCACCAGC
CACGCACTTCCATGGAGGCCTGAAGCAGCAAGGCCAGCAGCAGGGCCCCCGAGCGACTGC
TGCACAATCTCGGCATCTTCCAGGCAGGCTGAGGCTCTGTCGCGGGGAGGCTGCTCTCGG
GGCGACTCCCGCTGCGCCGAGGCAGGAAACTCGGCGGTCTCTTGGTCACTCTTCTTCCCC
TCTTTCTCTTCCCGGACGCGTGGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTTCGGATGTGAAACTTGAAAGGTTTTATTTCCTAACTACAGGTAAGAGGCGGGATAT
CTGGCGCCCACACAGCCTGAGCGTACCCGGGCTGGAGGCGGCAGGAGGGCAGGCAAGGAG
AGGGGGCTTTGGGGTCGGCTTCCGGGGTGAGAGGCGCCTGCCCCCTGAGCCCTCACTGGC
CCTTCTTGTGGGCGTTCTTGACGATGGCGTTTTTGAACAGCGTGACCAGGGGCGTCTGGC
TCTTCTCGGAGGTCATGAAGCCGCCGTAGCGCTTGTCCTTGGGCGGGCTGCCCCAGCGGA
AGTGCTCCATCTTATAGGGCCCTTCGTCCTTCTTCTCGGCCGCCTCGGCCTCGGCCACCA
GCCCGTACTCCAGCTCGGCCCGGGCGGCCGCGCCCTCGGCCGGGGCCTCGGGGTCCCGTG
CCGGCTCGGGGGGCGCCCCGGCCAGCTCCCTCCTGAACTCGAGGGGGAAGGCCTCGGCCA
ACTCGTCCTCGGCGCCGTTGGGATACACCTTCACCGGGCGCCGCTTCTTGCCCACGGGCT
TGCCCCAGCGGAAGTGCTCCATGGAGTAGGAGCGCTTGTCCTGGCGCGGGCCCGGCGCGA
CGCCATCTCCGCGGGGCCCGGGGCCTTCGCCCGCCGCCACCTCCTCCTCCTCGCGCTTCT
GGCCCGCGCCGCCGCCACCGCCACCGCCGCCGCTGCTGCTGCCATTCCGGCGGCCGAAGC
GGTCCCAGCGGAAGTGGCCCATGACGTACTTCCGGGGGTTCTCGGTCAGCGGTTGCGCGT
CGCCGTTGCCGGGAAACACGGGCGTCTCCGCAGAGAGATCTGGTTTGCAGGCCCGGATGC
ACGCCAGCAAGTTACTTTCCGTGGAGAGGTCCTGACACTGGCTGCTTTCCAGGCACCAGC
CACGCACTTCCATGGAGGCCTGAAGCAGCAAGGCCAGCAGCAGGGCCCCCGAGCGACTGC
TGCACAATCTCGGCATCTTCCAGGCAGGCTGAGGCTCTGTCGCGGGGAGGCTGCTCTCGG
GGCGACTCCCGCTGCGCCGAGGCAGGAAACTCGGCGGTCTCTTGGTCACTCTTCTTCCCC
TCTTTCTCTTCCCGGACGCGTGGG

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               COLI_PIG

Coded protein: 1 entry(ies)

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Protein identifier


               
               COLI_PIG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               11-848, gnl|bosTau2|chr11 (53900199-53901039)
               

               
               11-848, gnl|Hg17|chr2 (25295440-25296276)
               

               
               11-848, gnl|Mm7|chr12 (3878953-3878265)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               11-848, gnl|bosTau2|chr11 (53900199-53901039)
               

               
               11-848, gnl|Hg17|chr2 (25295440-25296276)
               

               
               11-848, gnl|Mm7|chr12 (3878953-3878265)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               pgl (4.50237)
               

               
               sin (0.174948)
               

               
               eje (0.0988338)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pgl (4.50237)
               

               
               sin (0.174948)
               

               
               eje (0.0988338)

	11-848, gnl\|bosTau2\|chr11 (53900199-53901039)
	11-848, gnl\|Hg17\|chr2 (25295440-25296276)
	11-848, gnl\|Mm7\|chr12 (3878953-3878265)