Non-Coding RNA Search

Ss1.1-Mixn-0018m15.5

Sequence:


               
               GCGGCCCCCACCCAGTACCGCATCTCTCTGCAGTTTGACTTCTTCGAGACCGAGGGCAAT
GACGTGTGCAAGTATGACTTCGTGGAGGTGCGCAGCGGACTCACAGCCGACTCCAAGCTG
CACGGCAAGTTCTGTGGCTCTGAAAAGCCCGAGGTCATCACCTCCCAGTACAACAACATG
CGTGTGGAGTTCAAGTCTGACAACACAGTCTCCAAAAAGGGCTTCAAGGCCCACTTCTTC
TCAGAAAAGAGGCCAGCTCTGCAGCCCCCCCGGGGACGCCCCCACCAGCTCAAATTCCGA
GTGCAGAAAAGAAACCGGACCCCCCAGTGAGGCCAGCCTGGCCTCCCGGACCCTTTGTTA
CTCAGGAACCTCACCTTGGACGGGATGGGCTGGGAGGCTTGGCTGCCGCCCACCCCCACC
TCCACTCTGCCATGTCGGCCGCCGCCCTCTGGCCGGACAGAACTGGTGCTCTCCTCGCCC
CCGTCCCCCTCACGTGGACAGGGGACCCTCCCTGCCTCCCACCCCTCCCATTTTGATGGT
GTCTGTGACATTTCCCATTGTGAAGTAAAAGAGGGACCCCTGCGTCCTGCTCCTTTCTCT
TGCAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCGGCCCCCACCCAGTACCGCATCTCTCTGCAGTTTGACTTCTTCGAGACCGAGGGCAAT
GACGTGTGCAAGTATGACTTCGTGGAGGTGCGCAGCGGACTCACAGCCGACTCCAAGCTG
CACGGCAAGTTCTGTGGCTCTGAAAAGCCCGAGGTCATCACCTCCCAGTACAACAACATG
CGTGTGGAGTTCAAGTCTGACAACACAGTCTCCAAAAAGGGCTTCAAGGCCCACTTCTTC
TCAGAAAAGAGGCCAGCTCTGCAGCCCCCCCGGGGACGCCCCCACCAGCTCAAATTCCGA
GTGCAGAAAAGAAACCGGACCCCCCAGTGAGGCCAGCCTGGCCTCCCGGACCCTTTGTTA
CTCAGGAACCTCACCTTGGACGGGATGGGCTGGGAGGCTTGGCTGCCGCCCACCCCCACC
TCCACTCTGCCATGTCGGCCGCCGCCCTCTGGCCGGACAGAACTGGTGCTCTCCTCGCCC
CCGTCCCCCTCACGTGGACAGGGGACCCTCCCTGCCTCCCACCCCTCCCATTTTGATGGT
GTCTGTGACATTTCCCATTGTGAAGTAAAAGAGGGACCCCTGCGTCCTGCTCCTTTCTCT
TGCAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               64-244, gnl|bosTau2|chr26 (7775918-7775738)
               

               
               64-244, gnl|Hg17|chr10 (98134514-98134334)
               

               
               64-244, gnl|Mm7|chr19 (40989872-40989692)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               64-244, gnl|bosTau2|chr26 (7775918-7775738)
               

               
               64-244, gnl|Hg17|chr10 (98134514-98134334)
               

               
               64-244, gnl|Mm7|chr19 (40989872-40989692)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               nca (0.136874)
               

               
               eep (0.122564)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nca (0.136874)
               

               
               eep (0.122564)

	64-244, gnl\|bosTau2\|chr26 (7775918-7775738)
	64-244, gnl\|Hg17\|chr10 (98134514-98134334)
	64-244, gnl\|Mm7\|chr19 (40989872-40989692)