Non-Coding RNA Search

Ss1.1-Mixn-0019e09.5

Sequence:


               
               GAGAAGAGAGCCAGGGGGCACCGCACACACTGGTTGTCCTCAGTCTGGGCTGTTGTTCCA
TCTTCCAAATTAAGACACAGCAAAATAATGACAGTAAAAACTGCTTTTAAAACTCCAAAT
CTTCGAACATCACAGCTTTTAAAATGATGGTGTAATCGGAAATGCAGACACACCCACTGC
ATCTCCACTGGAATTCGTATCTGGTTATGCAAATCTAACGCTGCCAGGCGGGTAAACGCC
TCAAAGGCAGCCCAGAGTAAATCCTGCCTCCCTCTAGGCTCAGGCCTGGAGTGGGTGAGG
GGATTCGCGGCGGTCCAGAGCTCCTAGCAAGGCCAGGCCTTGCTGGAGGGTGCACCTTGC
CCCCAACTCCGGAAGCACCTGCGGGCCCAAGAAGAAAGCCCCAGACATCACCCGCAGGAG
AGCAGGGCGGTTAGCGGCACCGGCATCGCCTCGGGTACCACGCGCCGCAGGGGAAGCGGC
CGGGTAGTCCTGCAGCATCTCGCGAGATCTCGCCGGCTGGGTCCAATACTGAGAGCTCAG
AAACGTAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGAAGAGAGCCAGGGGGCACCGCACACACTGGTTGTCCTCAGTCTGGGCTGTTGTTCCA
TCTTCCAAATTAAGACACAGCAAAATAATGACAGTAAAAACTGCTTTTAAAACTCCAAAT
CTTCGAACATCACAGCTTTTAAAATGATGGTGTAATCGGAAATGCAGACACACCCACTGC
ATCTCCACTGGAATTCGTATCTGGTTATGCAAATCTAACGCTGCCAGGCGGGTAAACGCC
TCAAAGGCAGCCCAGAGTAAATCCTGCCTCCCTCTAGGCTCAGGCCTGGAGTGGGTGAGG
GGATTCGCGGCGGTCCAGAGCTCCTAGCAAGGCCAGGCCTTGCTGGAGGGTGCACCTTGC
CCCCAACTCCGGAAGCACCTGCGGGCCCAAGAAGAAAGCCCCAGACATCACCCGCAGGAG
AGCAGGGCGGTTAGCGGCACCGGCATCGCCTCGGGTACCACGCGCCGCAGGGGAAGCGGC
CGGGTAGTCCTGCAGCATCTCGCGAGATCTCGCCGGCTGGGTCCAATACTGAGAGCTCAG
AAACGTAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               120-552, gnl|bosTau2|chr6 (42082872-42082448)
               

               
               120-552, gnl|Hg17|chr5 (127446325-127446754)
               

               
               120-552, gnl|Mm7|chr18 (58257202-58257549)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               120-552, gnl|bosTau2|chr6 (42082872-42082448)
               

               
               120-552, gnl|Hg17|chr5 (127446325-127446754)
               

               
               120-552, gnl|Mm7|chr18 (58257202-58257549)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ecc (0.115035)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ecc (0.115035)

	120-552, gnl\|bosTau2\|chr6 (42082872-42082448)
	120-552, gnl\|Hg17\|chr5 (127446325-127446754)
	120-552, gnl\|Mm7\|chr18 (58257202-58257549)