Non-Coding RNA Search

Ss1.1-Mixn-0019o06.5

Sequence:


               
               GGTGGGCTGAGGCACACGGTGGCGACAGGCTGTGCTGACCAGCGATTGCGGGGTGAGCTG
TGCTGCCGTCACTGACGCCCCACCCCGTTCCCTTGTGTCTCCCCGTGTTGCTGCCGCAGC
GCGAGCTGAGTGTCAGGTAAGACCTCCCACACTCTGCGCAGACAGAGGCTCTTCCAGAAT
CCACAGGGCCTTTGGAGTCTGGGTTGGCCCCTCCCACCATGTCCAACCCATGTGGTGGCC
CTGCCCCAGGCACAGAAGGGGTGGTATAGGGGCCCCCCTGCCGCTTCTGCCCACCTCTGC
CAGCAGTCAAGGAAATTAAGGCCCAGAGAGGTTAAGGGGCTTGCCCGAGGTCTCAGCACG
CTGACCGGAGGCTGGCCACGCCTCTGGAGGCTCTTGCCCCACTTGGGGCTAGTTGTGTGG
GGTCCGACATGAGGGCGCGGCTGTCCTGAGCCTGCACCGCTGGGCCTCCAGGACAGTGGC
CACAAGCATGGCCACCAGCAGCCAGAGGGCCTGCCTGATCCCAGGGCCAGTCTCCCTGCC
CAGGCCCTGGGGCCCTGCCCACCGGGCCTGCAGCCGAGGCATAGAGACGGGAGCAGCTGC
GGGAAGCCTAAGCCTGGGGGGTCTGGGGCTGTGGCTCCTTCCCGCGCTGAGAGGGACAGA
GCACCTGTCCCCACACGGTGGTCAGCACGAATGACCTGCCCCCAGCCCGCGCTTTCTGTG
GAGCTGGAAAGCACTGGCCTGACTGAGCCGCCGTCCACTGCGGCCACGTTGGACATGCCT
CTGGGGCGTCGGCGTGCCCCCAGCTTCCTGGCCTGCATGAGTCTCCGCTTGGCTCTCACC
CAGACCAGGGCACCTGCGGGTCTGGTCGCGTCAGGTCCTCTGGAAGCCTTTGTTCAGAGA
AGAAAAAGTTTCCAGGGTTCCAAAAACAGCTCAACGCAGCCAGCTAGGCTTTCCCTTCTC
TGGGCAGCCAAGGAAGTGGCGGCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGTGGGCTGAGGCACACGGTGGCGACAGGCTGTGCTGACCAGCGATTGCGGGGTGAGCTG
TGCTGCCGTCACTGACGCCCCACCCCGTTCCCTTGTGTCTCCCCGTGTTGCTGCCGCAGC
GCGAGCTGAGTGTCAGGTAAGACCTCCCACACTCTGCGCAGACAGAGGCTCTTCCAGAAT
CCACAGGGCCTTTGGAGTCTGGGTTGGCCCCTCCCACCATGTCCAACCCATGTGGTGGCC
CTGCCCCAGGCACAGAAGGGGTGGTATAGGGGCCCCCCTGCCGCTTCTGCCCACCTCTGC
CAGCAGTCAAGGAAATTAAGGCCCAGAGAGGTTAAGGGGCTTGCCCGAGGTCTCAGCACG
CTGACCGGAGGCTGGCCACGCCTCTGGAGGCTCTTGCCCCACTTGGGGCTAGTTGTGTGG
GGTCCGACATGAGGGCGCGGCTGTCCTGAGCCTGCACCGCTGGGCCTCCAGGACAGTGGC
CACAAGCATGGCCACCAGCAGCCAGAGGGCCTGCCTGATCCCAGGGCCAGTCTCCCTGCC
CAGGCCCTGGGGCCCTGCCCACCGGGCCTGCAGCCGAGGCATAGAGACGGGAGCAGCTGC
GGGAAGCCTAAGCCTGGGGGGTCTGGGGCTGTGGCTCCTTCCCGCGCTGAGAGGGACAGA
GCACCTGTCCCCACACGGTGGTCAGCACGAATGACCTGCCCCCAGCCCGCGCTTTCTGTG
GAGCTGGAAAGCACTGGCCTGACTGAGCCGCCGTCCACTGCGGCCACGTTGGACATGCCT
CTGGGGCGTCGGCGTGCCCCCAGCTTCCTGGCCTGCATGAGTCTCCGCTTGGCTCTCACC
CAGACCAGGGCACCTGCGGGTCTGGTCGCGTCAGGTCCTCTGGAAGCCTTTGTTCAGAGA
AGAAAAAGTTTCCAGGGTTCCAAAAACAGCTCAACGCAGCCAGCTAGGCTTTCCCTTCTC
TGGGCAGCCAAGGAAGTGGCGGCC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               5-515, gnl|bosTau2|chr13 (35187018-35187508)
               

               
               5-515, gnl|Hg17|chr20 (62045526-62045072)
               

               
               5-515, gnl|Mm7|chr2 (182073459-182073015)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-515, gnl|bosTau2|chr13 (35187018-35187508)
               

               
               5-515, gnl|Hg17|chr20 (62045526-62045072)
               

               
               5-515, gnl|Mm7|chr2 (182073459-182073015)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pla (0.267344)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.267344)

	5-515, gnl\|bosTau2\|chr13 (35187018-35187508)
	5-515, gnl\|Hg17\|chr20 (62045526-62045072)
	5-515, gnl\|Mm7\|chr2 (182073459-182073015)