Ss1.1-Mixn-0020a05.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCCCGTGAGAAGTACGGCACTTTGTCCTGGAAGGAGAGATCGTTTATAAAGTACAAAGAA AAAAAACAGCAGCAACCCTTAAAGCTAAAAGAAAAAGTAGAAAGAGATTCAGATGTACTT CCTATAATTATTAAAGGTGATGTTGATGGTTCTCTTGAGGCCATTTTAAACATTATGGAT ACCTATGATGCTTCACATGAGTGCGAACTAGAATTAGTACATTTCGGTGTGGGTGATATT AGTGAAAATGATGTTAACCTTGCTGAAACATTTAATGGTGTTATATATGGCTTCAATGTG AATGCAAGCAATGTTATCCAGCAGTCAGCTGCAAAAAAAGGAGTAAAAATTAAACTTCAC AAAATCATTTACCGTCTTATTGAAGATGTGCTGGAGGAAATATGAGCAAGAACAGGAGAA AAGTAAAGAGGATCTGAAGTTAATAGAAGAAAAGCGAAAGGAACACCAAGAAGCACATCA GAAAGCCCGTGAGAAGTACGGCACTTTGTCCTGGAAGGAGAGATCGTTTATAAAGTACAA AGAAAAAAAACAGCAGCAACCCTTAAAGCTAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCCCGTGAGAAGTACGGCACTTTGTCCTGGAAGGAGAGATCGTTTATAAAGTACAAAGAA AAAAAACAGCAGCAACCCTTAAAGCTAAAAGAAAAAGTAGAAAGAGATTCAGATGTACTT CCTATAATTATTAAAGGTGATGTTGATGGTTCTCTTGAGGCCATTTTAAACATTATGGAT ACCTATGATGCTTCACATGAGTGCGAACTAGAATTAGTACATTTCGGTGTGGGTGATATT AGTGAAAATGATGTTAACCTTGCTGAAACATTTAATGGTGTTATATATGGCTTCAATGTG AATGCAAGCAATGTTATCCAGCAGTCAGCTGCAAAAAAAGGAGTAAAAATTAAACTTCAC AAAATCATTTACCGTCTTATTGAAGATGTGCTGGAGGAAATATGAGCAAGAACAGGAGAA AAGTAAAGAGGATCTGAAGTTAATAGAAGAAAAGCGAAAGGAACACCAAGAAGCACATCA GAAAGCCCGTGAGAAGTACGGCACTTTGTCCTGGAAGGAGAGATCGTTTATAAAGTACAA AGAAAAAAAACAGCAGCAACCCTTAAAGCTAAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 29 entry(ies) | More info |
| Aligned organism(s): 29 entry(ies) | Help | Less info |
| 277-399, gnl|bosTau2|chr11 (21983107-21982985) | |
| 277-399, gnl|canFam2|chr10 (59287339-59287179) | |
| 277-399, gnl|canFam2|chr10 (59287166-59287387) | |
| 277-399, gnl|danRer3|chr6 (2944664-2944814) | |
| 277-399, gnl|danRer3|chr6 (2944849-2944628) | |
| 277-399, gnl|dasNov1|scaffold_207763 (1169-1006) | |
| 277-399, gnl|dasNov1|scaffold_207763 (993-1215) | |
| 277-399, gnl|echTel1|scaffold_324776 (45267-45427) | |
| 277-399, gnl|echTel1|scaffold_324776 (45440-45215) | |
| 277-399, gnl|galGal2|chr3 (2359941-2360104) | |
| 277-399, gnl|galGal2|chr3 (2360117-2359894) | |
| 277-399, gnl|hg17|chr1 (120857262-120857424) | |
| 277-399, gnl|hg17|chr2 (55378788-55379015) | |
| 277-399, gnl|Hg17|chr2 (55378963-55378841) | |
| 277-399, gnl|mm7|chr11 (29494351-29494514) | |
| 277-399, gnl|mm7|chr11 (29494523-29494303) | |
| 277-399, gnl|Mm7|chr11 (29494350-29494472) | |
| 277-399, gnl|monDom2|scaffold_1 (18161869-18161706) | |
| 277-399, gnl|monDom2|scaffold_1 (18161693-18161918) | |
| 277-399, gnl|oryCun1|scaffold_176432 (123822-123985) | |
| 277-399, gnl|oryCun1|scaffold_176432 (123997-123772) | |
| 277-399, gnl|panTro1|chr12 (57509329-57509166) | |
| 277-399, gnl|panTro1|chr12 (57509153-57509380) | |
| 277-399, gnl|rheMac2|chr13 (55566991-55567218) | |
| 277-399, gnl|rheMac2|chr6 (47983910-47983748) | |
| 277-399, gnl|rn3|chr14 (110584170-110584333) | |
| 277-399, gnl|rn3|chr14 (110584342-110584122) | |
| 277-399, gnl|xenTro1|scaffold_234 (772791-772949) | |
| 277-399, gnl|xenTro1|scaffold_234 (772962-772771) |
| Aligned organism(s): 29 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 277-399, gnl|bosTau2|chr11 (21983107-21982985) | |
| 277-399, gnl|canFam2|chr10 (59287339-59287179) | |
| 277-399, gnl|canFam2|chr10 (59287166-59287387) | |
| 277-399, gnl|danRer3|chr6 (2944664-2944814) | |
| 277-399, gnl|danRer3|chr6 (2944849-2944628) | |
| 277-399, gnl|dasNov1|scaffold_207763 (1169-1006) | |
| 277-399, gnl|dasNov1|scaffold_207763 (993-1215) | |
| 277-399, gnl|echTel1|scaffold_324776 (45267-45427) | |
| 277-399, gnl|echTel1|scaffold_324776 (45440-45215) | |
| 277-399, gnl|galGal2|chr3 (2359941-2360104) | |
| 277-399, gnl|galGal2|chr3 (2360117-2359894) | |
| 277-399, gnl|hg17|chr1 (120857262-120857424) | |
| 277-399, gnl|hg17|chr2 (55378788-55379015) | |
| 277-399, gnl|Hg17|chr2 (55378963-55378841) | |
| 277-399, gnl|mm7|chr11 (29494351-29494514) | |
| 277-399, gnl|mm7|chr11 (29494523-29494303) | |
| 277-399, gnl|Mm7|chr11 (29494350-29494472) | |
| 277-399, gnl|monDom2|scaffold_1 (18161869-18161706) | |
| 277-399, gnl|monDom2|scaffold_1 (18161693-18161918) | |
| 277-399, gnl|oryCun1|scaffold_176432 (123822-123985) | |
| 277-399, gnl|oryCun1|scaffold_176432 (123997-123772) | |
| 277-399, gnl|panTro1|chr12 (57509329-57509166) | |
| 277-399, gnl|panTro1|chr12 (57509153-57509380) | |
| 277-399, gnl|rheMac2|chr13 (55566991-55567218) | |
| 277-399, gnl|rheMac2|chr6 (47983910-47983748) | |
| 277-399, gnl|rn3|chr14 (110584170-110584333) | |
| 277-399, gnl|rn3|chr14 (110584342-110584122) | |
| 277-399, gnl|xenTro1|scaffold_234 (772791-772949) | |
| 277-399, gnl|xenTro1|scaffold_234 (772962-772771) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nco (0.161734) |