Ss1.1-Mixn-0020i22.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ACACCAACCAGGAGCTTCGTACTTGTCATCTCACTTAGCCCCCAGCAGCACCTCACAGAG ACCTTGCGAGGCAGAGTACCAGGAGAAGCAGCGCAAGCGCGAGGCTGAGGAGCGGCGCCG CTTTCCCCTGGAGCAGCGGCTGAAGGAGCACATCATTGGCCAGGAGAGCGCCATCGCCGC CGTGGGGGCCGCGATCCGGAGGAAGGAGAACGGCTGGTATGACGAAGAGCACCCTCTGGT CTTCCTCTTCCTGGGATCGTCGGGAATAGGAAAAACGGAGCTGGCCAAGCAGACAGCCAG ATACATGCACAAAGATGCCAAGAAGGGTTTCATCAGGCTGGACATGTCCGAGTTCCAGGA GCGGCATGAGGTGGCCAAGTTTATAGGGTCCCCACCAGGCTACGTTGGCCACGAGGAGGG TGGCCAGCTGACCAAGAAGCTGAAGCAGTGCCCCAACGCCGTGGTGCTCTTCGATGAGGT GGACAAAGCCCATCCAGATGTGCTGACCATCATGCTGCAGCTGTTTGACGAGGGCCGGCT GACCGACGGCAAAGGGAAGACCATCGACTGCAAGGACGCCATCTTCATCATGACCTCCAA CGTGGCCAGCGACGAGATAGCGCAGCACGCGCTGCAGCTGAGGCAGGAGGCTCTGGAGAT GAGCCGTAACCGGATCGCCGAGAACCTCGGGGACGTCCAGAGTGGTGACAAGATCACCAT CTCAAAGAACTTCAAGGAGAACGTGATCCGCCCCATCCTGAAAGCTCACTTCCGGAGAGA TGAGTTTCTGGGACGAATCAATGAAATCGTCTACTTTCTCCCCTTCTGCCACTCGGAGCT CATCCAGCTCGTCAACAAGGAGCTGAACTTCTGGGCCAAGAGAGCCAAGCAGAGGCACAA CATCACGCTGCTGTGGGACCGCGAGGTGGCGGACGTGCTGGTCGACGGCTACAACGTGCA CTACGGCGCCCGCTCCATTAAGCACGAGGTGGAGCGCCGGGTGGTGAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ACACCAACCAGGAGCTTCGTACTTGTCATCTCACTTAGCCCCCAGCAGCACCTCACAGAG ACCTTGCGAGGCAGAGTACCAGGAGAAGCAGCGCAAGCGCGAGGCTGAGGAGCGGCGCCG CTTTCCCCTGGAGCAGCGGCTGAAGGAGCACATCATTGGCCAGGAGAGCGCCATCGCCGC CGTGGGGGCCGCGATCCGGAGGAAGGAGAACGGCTGGTATGACGAAGAGCACCCTCTGGT CTTCCTCTTCCTGGGATCGTCGGGAATAGGAAAAACGGAGCTGGCCAAGCAGACAGCCAG ATACATGCACAAAGATGCCAAGAAGGGTTTCATCAGGCTGGACATGTCCGAGTTCCAGGA GCGGCATGAGGTGGCCAAGTTTATAGGGTCCCCACCAGGCTACGTTGGCCACGAGGAGGG TGGCCAGCTGACCAAGAAGCTGAAGCAGTGCCCCAACGCCGTGGTGCTCTTCGATGAGGT GGACAAAGCCCATCCAGATGTGCTGACCATCATGCTGCAGCTGTTTGACGAGGGCCGGCT GACCGACGGCAAAGGGAAGACCATCGACTGCAAGGACGCCATCTTCATCATGACCTCCAA CGTGGCCAGCGACGAGATAGCGCAGCACGCGCTGCAGCTGAGGCAGGAGGCTCTGGAGAT GAGCCGTAACCGGATCGCCGAGAACCTCGGGGACGTCCAGAGTGGTGACAAGATCACCAT CTCAAAGAACTTCAAGGAGAACGTGATCCGCCCCATCCTGAAAGCTCACTTCCGGAGAGA TGAGTTTCTGGGACGAATCAATGAAATCGTCTACTTTCTCCCCTTCTGCCACTCGGAGCT CATCCAGCTCGTCAACAAGGAGCTGAACTTCTGGGCCAAGAGAGCCAAGCAGAGGCACAA CATCACGCTGCTGTGGGACCGCGAGGTGGCGGACGTGCTGGTCGACGGCTACAACGTGCA CTACGGCGCCCGCTCCATTAAGCACGAGGTGGAGCGCCGGGTGGTGAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
| 72-189, gnl|bosTau2|chr15 (29777305-29777422) | |
| 72-189, gnl|canFam2|chr21 (28833349-28833196) | |
| 72-189, gnl|danRer3|chr15 (19863127-19862992) | |
| 72-189, gnl|dasNov1|scaffold_28184 (4972-4855) | |
| 72-189, gnl|echTel1|scaffold_311431 (176144-175997) | |
| 72-189, gnl|fr1|chrUn (260167359-260167216) | |
| 72-189, gnl|hg17|chr11 (71705791-71705938) | |
| 72-189, gnl|Hg17|chr11 (71705917-71705800) | |
| 72-189, gnl|loxAfr1|scaffold_1471 (133735-133588) | |
| 72-189, gnl|mm7|chr7 (97809953-97809805) | |
| 72-189, gnl|Mm7|chr7 (97809822-97809939) | |
| 72-189, gnl|monDom2|scaffold_74 (6151773-6151626) | |
| 72-189, gnl|oryCun1|scaffold_198776 (42119-42274) | |
| 72-189, gnl|panTro1|chr9 (72974341-72974488) | |
| 72-189, gnl|rheMac2|chr14 (70389133-70389280) | |
| 72-189, gnl|rn3|chr1 (159300374-159300226) | |
| 72-189, gnl|xenTro1|scaffold_971 (87444-87581) | |
| 369-533, gnl|bosTau2|chr15 (29794245-29794409) | |
| 369-533, gnl|Hg17|chr11 (71690658-71690494) | |
| 369-533, gnl|Mm7|chr7 (97825446-97825610) | |
| 757-892, gnl|bosTau2|chr15 (29800735-29800871) | |
| 757-892, gnl|Hg17|chr11 (71683143-71683009) | |
| 757-892, gnl|Mm7|chr7 (97832526-97832669) |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 72-189, gnl|bosTau2|chr15 (29777305-29777422) | |
| 72-189, gnl|canFam2|chr21 (28833349-28833196) | |
| 72-189, gnl|danRer3|chr15 (19863127-19862992) | |
| 72-189, gnl|dasNov1|scaffold_28184 (4972-4855) | |
| 72-189, gnl|echTel1|scaffold_311431 (176144-175997) | |
| 72-189, gnl|fr1|chrUn (260167359-260167216) | |
| 72-189, gnl|hg17|chr11 (71705791-71705938) | |
| 72-189, gnl|Hg17|chr11 (71705917-71705800) | |
| 72-189, gnl|loxAfr1|scaffold_1471 (133735-133588) | |
| 72-189, gnl|mm7|chr7 (97809953-97809805) | |
| 72-189, gnl|Mm7|chr7 (97809822-97809939) | |
| 72-189, gnl|monDom2|scaffold_74 (6151773-6151626) | |
| 72-189, gnl|oryCun1|scaffold_198776 (42119-42274) | |
| 72-189, gnl|panTro1|chr9 (72974341-72974488) | |
| 72-189, gnl|rheMac2|chr14 (70389133-70389280) | |
| 72-189, gnl|rn3|chr1 (159300374-159300226) | |
| 72-189, gnl|xenTro1|scaffold_971 (87444-87581) | |
| 369-533, gnl|bosTau2|chr15 (29794245-29794409) | |
| 369-533, gnl|Hg17|chr11 (71690658-71690494) | |
| 369-533, gnl|Mm7|chr7 (97825446-97825610) | |
| 757-892, gnl|bosTau2|chr15 (29800735-29800871) | |
| 757-892, gnl|Hg17|chr11 (71683143-71683009) | |
| 757-892, gnl|Mm7|chr7 (97832526-97832669) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| fli (0.202881) | |
| csp (0.161186) | |
| cli (0.152812) | |
| ese (0.126502) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fli (0.202881) | |
| csp (0.161186) | |
| cli (0.152812) | |
| ese (0.126502) |