Non-Coding RNA Search

Ss1.1-Mixn-0020l19.5

Sequence:


               
               GGTTGGCCCACTGCCCAAGGTATTGCGTGAAGCAGCCCCGGTTGACCTCCTGGCCGCTTT
CGACAGACATGCCAGGGAAGTCGCAGCAGCACGGTTGCTGTCCACGTGGCGAAGGCTGCC
CCAGCTTCTCCGGGCCTATGGTGGTCCCCGATACCTTGCCAGGTGCCCCCCACCCCGGAG
TCAGCGCACCCAGGGGTTCCCAGAAGATGAACCATAATCCCTGACAGCGCCCCCACCTGG
CCTGGTGCTCCCAAAGCCTGACCCACCAGGTGGGAATGGGGATGGCAATGAAGCCAGTTT
AAGGCAAGGAAGATGGCCTGCAGAAGGTACTGGAACATTCAGAGGGTGACTTTTGGTGGC
TTCAGCATCACCCCTCGCTCCACAGTCTGGTAGAGTTATGGCATCTTCTCTAGATCCACC
AAAGTGTCTTGGGCAAGCTACACAAAGATCCAGCGTCAGCAGCTAAGAGTTGGTCCAGAT
GTTGGTTTGTGTGGGATGATTCTGTAGAAAGATCCAGCTTTTAGGGAAGTAAGAACTAGC
TGCTGGAACAGTTCCCTCACCCTCGGGCTCCCCAGTTGAAAGAGGCTAATGTGGGGTTTT
TTGGACACAACTATTTGGTAGGTCCTGAATTCCTGATTGCCTTTTAAAAAATCTGAATCC
TATCTACAACTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGTTGGCCCACTGCCCAAGGTATTGCGTGAAGCAGCCCCGGTTGACCTCCTGGCCGCTTT
CGACAGACATGCCAGGGAAGTCGCAGCAGCACGGTTGCTGTCCACGTGGCGAAGGCTGCC
CCAGCTTCTCCGGGCCTATGGTGGTCCCCGATACCTTGCCAGGTGCCCCCCACCCCGGAG
TCAGCGCACCCAGGGGTTCCCAGAAGATGAACCATAATCCCTGACAGCGCCCCCACCTGG
CCTGGTGCTCCCAAAGCCTGACCCACCAGGTGGGAATGGGGATGGCAATGAAGCCAGTTT
AAGGCAAGGAAGATGGCCTGCAGAAGGTACTGGAACATTCAGAGGGTGACTTTTGGTGGC
TTCAGCATCACCCCTCGCTCCACAGTCTGGTAGAGTTATGGCATCTTCTCTAGATCCACC
AAAGTGTCTTGGGCAAGCTACACAAAGATCCAGCGTCAGCAGCTAAGAGTTGGTCCAGAT
GTTGGTTTGTGTGGGATGATTCTGTAGAAAGATCCAGCTTTTAGGGAAGTAAGAACTAGC
TGCTGGAACAGTTCCCTCACCCTCGGGCTCCCCAGTTGAAAGAGGCTAATGTGGGGTTTT
TTGGACACAACTATTTGGTAGGTCCTGAATTCCTGATTGCCTTTTAAAAAATCTGAATCC
TATCTACAACTG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-558, gnl|bosTau2|chr25 (11395931-11396495)
               

               
               1-558, gnl|Hg17|chr16 (19034676-19035242)
               

               
               1-558, gnl|Mm7|chr7 (114412516-114411928)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-558, gnl|bosTau2|chr25 (11395931-11396495)
               

               
               1-558, gnl|Hg17|chr16 (19034676-19035242)
               

               
               1-558, gnl|Mm7|chr7 (114412516-114411928)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pla (0.133672)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.133672)

	1-558, gnl\|bosTau2\|chr25 (11395931-11396495)
	1-558, gnl\|Hg17\|chr16 (19034676-19035242)
	1-558, gnl\|Mm7\|chr7 (114412516-114411928)