Non-Coding RNA Search

Ss1.1-Mixn-0021c05.5

Sequence:


               
               GGGAGTTCACTTGTTGTTAGTTGAGAGATTGCACTAGGTGAGTATTTGTGTGATTATTTT
GTTTATAAAGGTGTTCAATACTTAAAAGCACCTCACACAGAAACTTTTTTTCTGTAGTAA
TATTTTAAGGCAGTAATGAGTGTTATATTGTAAATTTTGTTATGTAAATAGAAGTGTATT
ATTTTCATAATAATTTAGTGTTGAGTTGGGCTTCACAACTTTTCCTTTTCATCAAGGGTG
AAGGTTTTAATTTGTAGTTGTGACAGTGTGTTCTTTATGAGTACTGTAAAGAACAAGACA
GTAAGATGATTATTCCATATTTCTGACCAAACTAGACCACTTTGTCCAGTGCTTCCTTTC
CCAGCAGTGTCTCTACATTAGGTCTTCTTAGTTGCTTTCTCCTCTTCATTCAGGGTTCTG
AGAATTCAGGTTAAAGATGAGCAGCATGGACAAGTAAGAGGAAGATTCTTCCTGCCCTGG
GCAGGATAATAAACAAGGAAGAATAAGCTCTGAAGCCTTAATGCACTTGATTGCTGATTA
TGGGATTAAGACAGTTAACAACCCTCATGAATAAAAATTTTAAAACATAACTTTTCTTTC
TTGAAACACTTACTTTTTTCTGTTCCATGGACTGTATATTTCCTATTCATAAGAGGAAAT
AGAAGGCAATAAGGTTGGGTTAATTGTCCACAATACCTCTACCAGACATCTATTACAGTA
ACTCTTATTTATATATTTCCCCCAAAAAAAAAAAAGCTGTGTAGGAGGTGAGGTTTTATA
TCTTAGAACAGACTGAAAACATACAGATATATTCCTTTCTATTTGAATTTATTTGGTTTC
TGAATTTGAAGAGTGGGAGGTCAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGGAGTTCACTTGTTGTTAGTTGAGAGATTGCACTAGGTGAGTATTTGTGTGATTATTTT
GTTTATAAAGGTGTTCAATACTTAAAAGCACCTCACACAGAAACTTTTTTTCTGTAGTAA
TATTTTAAGGCAGTAATGAGTGTTATATTGTAAATTTTGTTATGTAAATAGAAGTGTATT
ATTTTCATAATAATTTAGTGTTGAGTTGGGCTTCACAACTTTTCCTTTTCATCAAGGGTG
AAGGTTTTAATTTGTAGTTGTGACAGTGTGTTCTTTATGAGTACTGTAAAGAACAAGACA
GTAAGATGATTATTCCATATTTCTGACCAAACTAGACCACTTTGTCCAGTGCTTCCTTTC
CCAGCAGTGTCTCTACATTAGGTCTTCTTAGTTGCTTTCTCCTCTTCATTCAGGGTTCTG
AGAATTCAGGTTAAAGATGAGCAGCATGGACAAGTAAGAGGAAGATTCTTCCTGCCCTGG
GCAGGATAATAAACAAGGAAGAATAAGCTCTGAAGCCTTAATGCACTTGATTGCTGATTA
TGGGATTAAGACAGTTAACAACCCTCATGAATAAAAATTTTAAAACATAACTTTTCTTTC
TTGAAACACTTACTTTTTTCTGTTCCATGGACTGTATATTTCCTATTCATAAGAGGAAAT
AGAAGGCAATAAGGTTGGGTTAATTGTCCACAATACCTCTACCAGACATCTATTACAGTA
ACTCTTATTTATATATTTCCCCCAAAAAAAAAAAAGCTGTGTAGGAGGTGAGGTTTTATA
TCTTAGAACAGACTGAAAACATACAGATATATTCCTTTCTATTTGAATTTATTTGGTTTC
TGAATTTGAAGAGTGGGAGGTCAG

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               1-864, gnl|bosTau2|chr10 (39554892-39554072)
               

               
               1-864, gnl|Hg17|chr15 (54316336-54315469)
               

               
               1-864, gnl|Mm7|chr9 (72571813-72572561)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-864, gnl|bosTau2|chr10 (39554892-39554072)
               

               
               1-864, gnl|Hg17|chr15 (54316336-54315469)
               

               
               1-864, gnl|Mm7|chr9 (72571813-72572561)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               eye (0.170503)
               

               
               csk (0.140746)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eye (0.170503)
               

               
               csk (0.140746)

	1-864, gnl\|bosTau2\|chr10 (39554892-39554072)
	1-864, gnl\|Hg17\|chr15 (54316336-54315469)
	1-864, gnl\|Mm7\|chr9 (72571813-72572561)