Non-Coding RNA Search

Ss1.1-Mixn-0021d01.5

Sequence:


               
               ACACCATGGTCCTGCGGGACCGCGGCTGCACCACCCAGGCCGCTGTCAACGTCTCCTTCT
GCGAGGGCTTCTGTCCGGAACCGGAAGTACCCAGGTTCTCCTTGGAGGCCCCGGCCGTGC
AGTGCCGCTGCACCTGCTGCCAGGAGACCAGGACCCACCAGGAGGTGGTGACCATGCAGT
GTCCCGACGGGACGGCCATCCAGCACACCTACACCCAGGTGGACGAGTGCAGCTGCGGCC
CGGCCTGCGTCCCCTCCCCCCAGGCTCCCGGGGACAGCAGTCCTCCTGCTCTAGGGGCCG
CGAATGTCTGACGCTCTGCCCTGCCCCACACGGCCTCCTCATCTGGCACCAGAACACGCC
CCGCCCAACCACGGGCACCTCCGGAGCCCACTCTACGCCTGCCCCAGTGAAACCCAGGCC
CGGCGGGTGACCGCGCAGTGAGGGTCTGCTTGGGGGTCCTCAGGCGGGGCCCCGCCCTCA
GCCCCTCCTGCCTCTTTTGGCCACCTGTCTGGCCCTCGGAGCCCACCCCTCATCTGAAAC
ACGCGCACCCACTCTGTCCAGCCTCACACCCTCTGCCCCGGGGAGATAACTGGACACCCA
CTGCCATGTGCTCCCACCGCGGGCCTGTGCGCCCCCACAGCCCCGGGGGGCATGGATTCC
CACTGGCTACCTCCTGCAGCCACGCAGGCTGAGGCATGTCCAGGGAAGGCTGGTGGCCTC
CAGGGAGCTGCAGCCGGCCGGCTGGCTGCCCAGGTCTGGACCCGGGCTGAGGCTATGGCG
ACCGAGGGGTGGGCCAGGGCGGGGTCCCCACGGCACGCCCTCTGTTGCCCCAGCCCCGCT
CTTGCAAATAAAGCTGAGCATCTCGTGCAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACACCATGGTCCTGCGGGACCGCGGCTGCACCACCCAGGCCGCTGTCAACGTCTCCTTCT
GCGAGGGCTTCTGTCCGGAACCGGAAGTACCCAGGTTCTCCTTGGAGGCCCCGGCCGTGC
AGTGCCGCTGCACCTGCTGCCAGGAGACCAGGACCCACCAGGAGGTGGTGACCATGCAGT
GTCCCGACGGGACGGCCATCCAGCACACCTACACCCAGGTGGACGAGTGCAGCTGCGGCC
CGGCCTGCGTCCCCTCCCCCCAGGCTCCCGGGGACAGCAGTCCTCCTGCTCTAGGGGCCG
CGAATGTCTGACGCTCTGCCCTGCCCCACACGGCCTCCTCATCTGGCACCAGAACACGCC
CCGCCCAACCACGGGCACCTCCGGAGCCCACTCTACGCCTGCCCCAGTGAAACCCAGGCC
CGGCGGGTGACCGCGCAGTGAGGGTCTGCTTGGGGGTCCTCAGGCGGGGCCCCGCCCTCA
GCCCCTCCTGCCTCTTTTGGCCACCTGTCTGGCCCTCGGAGCCCACCCCTCATCTGAAAC
ACGCGCACCCACTCTGTCCAGCCTCACACCCTCTGCCCCGGGGAGATAACTGGACACCCA
CTGCCATGTGCTCCCACCGCGGGCCTGTGCGCCCCCACAGCCCCGGGGGGCATGGATTCC
CACTGGCTACCTCCTGCAGCCACGCAGGCTGAGGCATGTCCAGGGAAGGCTGGTGGCCTC
CAGGGAGCTGCAGCCGGCCGGCTGGCTGCCCAGGTCTGGACCCGGGCTGAGGCTATGGCG
ACCGAGGGGTGGGCCAGGGCGGGGTCCCCACGGCACGCCCTCTGTTGCCCCAGCCCCGCT
CTTGCAAATAAAGCTGAGCATCTCGTGCAAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               92-862, gnl|bosTau2|chr29 (44514302-44515108)
               

               
               92-862, gnl|Hg17|chr11 (1239192-1239973)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               92-862, gnl|bosTau2|chr29 (44514302-44515108)
               

               
               92-862, gnl|Hg17|chr11 (1239192-1239973)

Expressed library(ies): 3 entry(ies)

More info

Expressed library(ies): 3 entry(ies)

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               pty (0.713572)
               

               
               eep (0.122564)
               

               
               jca (0.11396)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pty (0.713572)
               

               
               eep (0.122564)
               

               
               jca (0.11396)

	92-862, gnl\|bosTau2\|chr29 (44514302-44515108)
	92-862, gnl\|Hg17\|chr11 (1239192-1239973)