Non-Coding RNA Search

Ss1.1-Mixn-0021g13.5

Sequence:


               
               TATCACCTTCAGGAAGTTGTTCTGGGGAACGCGCTCCCATAGGCTGCTGAGAAACCTGCC
AGGGCCCTGCGCTTCGCCCTCCCCCACCTCCTGCAAACGCTCCAGAAGCAGCTCCGCCTG
GGTCTTCATCAGTGAGTCCTCCTGAAGGACCGGGTTCTCTCTATAGGCGTTGAAGTGCAG
CAGGTGAACAGCGGCCCGGCGGCGGGCGAGAAGGGCCAGGCTGCCTTGGAGCGTCTCTTC
CTCCGCGTCTGGGACGCCAGGGCCAGGAAAGAGCTGCTGCAGCAGGTACTGAAAGGCGGC
ATCCCCGAGAGCCCGGTTCGCCAGCAGTCGCAGAGACAACAGATGGTCACAGTGCTCCAA
CGCCTGGAAGTTTACCAACCCCGGGGCTGGAGCGGGCCCAGAGTCGCCCTCCTGCTTCCA
CTGGTTTTGCAGTCGCTGTTCCAGAGCAGTGCGAATGCGGGCATGGCGGCCAAAGCGCCT
GTAGACGTGGCGCAGGTAGTGAGCCCACTGTAAGGCCCTGCGCACGGTCGCGGGGTCCCA
GCTGCTGACATGGGAAGTGCGGGAGACAGCCAGAACCTCAGAGAAGCGCTCCAAGTGCTC
TACGAGCGATTCCATGGGGACGCG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TATCACCTTCAGGAAGTTGTTCTGGGGAACGCGCTCCCATAGGCTGCTGAGAAACCTGCC
AGGGCCCTGCGCTTCGCCCTCCCCCACCTCCTGCAAACGCTCCAGAAGCAGCTCCGCCTG
GGTCTTCATCAGTGAGTCCTCCTGAAGGACCGGGTTCTCTCTATAGGCGTTGAAGTGCAG
CAGGTGAACAGCGGCCCGGCGGCGGGCGAGAAGGGCCAGGCTGCCTTGGAGCGTCTCTTC
CTCCGCGTCTGGGACGCCAGGGCCAGGAAAGAGCTGCTGCAGCAGGTACTGAAAGGCGGC
ATCCCCGAGAGCCCGGTTCGCCAGCAGTCGCAGAGACAACAGATGGTCACAGTGCTCCAA
CGCCTGGAAGTTTACCAACCCCGGGGCTGGAGCGGGCCCAGAGTCGCCCTCCTGCTTCCA
CTGGTTTTGCAGTCGCTGTTCCAGAGCAGTGCGAATGCGGGCATGGCGGCCAAAGCGCCT
GTAGACGTGGCGCAGGTAGTGAGCCCACTGTAAGGCCCTGCGCACGGTCGCGGGGTCCCA
GCTGCTGACATGGGAAGTGCGGGAGACAGCCAGAACCTCAGAGAAGCGCTCCAAGTGCTC
TACGAGCGATTCCATGGGGACGCG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61822061|ref|XP_588722.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61822061|ref|XP_588722.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               4-619, gnl|bosTau2|chr29 (16531944-16531329)
               

               
               4-619, gnl|Hg17|chr11 (22603321-22603936)
               

               
               4-619, gnl|Mm7|chr7 (48095101-48095674)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-619, gnl|bosTau2|chr29 (16531944-16531329)
               

               
               4-619, gnl|Hg17|chr11 (22603321-22603936)
               

               
               4-619, gnl|Mm7|chr7 (48095101-48095674)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               cov (0.132153)
               

               
               eep (0.122564)
               

               
               cty (0.10408)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cov (0.132153)
               

               
               eep (0.122564)
               

               
               cty (0.10408)

	4-619, gnl\|bosTau2\|chr29 (16531944-16531329)
	4-619, gnl\|Hg17\|chr11 (22603321-22603936)
	4-619, gnl\|Mm7\|chr7 (48095101-48095674)