Non-Coding RNA Search

Ss1.1-Mixn-0021h14.5

Sequence:


               
               TGCACAATCAAGGTACCAGCTTCCTCCTGGGACCAGGGTCACCAGTGACCATGGAATCAT
CACCCTGGCTGTCTGGATGCCCAGGGCGCCCACCAACCTCCCTCCTTCTGGAGTTTGGAT
CTTCGGGGTCCACCCTTTCCGGTGCTGGAGCCACTACCTCCGGGGTGGACCACATGCCGG
TGTGAGGCAGAACTGCCCCCAGAGGAAGGCCTGGCCCCGGGGCAGGGGCTTGGAGTTAGG
GCTGCTGCGCAGGACAGACAGGTGTGCGGAACTGGGATGGGGCCCCTAACACCGTAGCCG
CCCTTGCCCTTCCACCGGGGCTCATGGTACATACCTCCCTCCCCAAGCCCCCTCAATTTT
GTGTGGGGAAGAGGAGACTCCGAAGGCAAGGTCTCTACCCCCGCCTTTTATTCTCTTCTC
CCAGCTTGTACCTGGAATCTTGCTGGGAGCTCTCCCTCCCTTCCCCACAGCACGAACCTT
CCAGCTGTCAAGTTTGAAAAGAAGCCACTGTGCCTCCAGGGCCTCCTGCACCGGAGAGAG
AGGCTCTCTGCTCTGGGAGGCTGCTCCAGCGTCTCCCTCCCCGCCTGCATTCTCCATTCC
CTTAAATGGGCACCATCAGGGTGGCTGGCACAGCATGGGGCATGGGACGAGCACTGTGTG
TCTCCACTCCGTCACCAGGGACAGCCTTCCGGGGGTGAGGAGTGGGGGCCTCGCTCTGCA
ATTCCCAGGGCCAGATCTTTCCCATCCAAGCAATAATGGAAGGAGGGCCCAGGGCCAGGG
ACACTCAGGGACACTGTCGGGGCAGGGGCCCCCACATGGTAGTGTTTTTCTTTAGGAAGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGCACAATCAAGGTACCAGCTTCCTCCTGGGACCAGGGTCACCAGTGACCATGGAATCAT
CACCCTGGCTGTCTGGATGCCCAGGGCGCCCACCAACCTCCCTCCTTCTGGAGTTTGGAT
CTTCGGGGTCCACCCTTTCCGGTGCTGGAGCCACTACCTCCGGGGTGGACCACATGCCGG
TGTGAGGCAGAACTGCCCCCAGAGGAAGGCCTGGCCCCGGGGCAGGGGCTTGGAGTTAGG
GCTGCTGCGCAGGACAGACAGGTGTGCGGAACTGGGATGGGGCCCCTAACACCGTAGCCG
CCCTTGCCCTTCCACCGGGGCTCATGGTACATACCTCCCTCCCCAAGCCCCCTCAATTTT
GTGTGGGGAAGAGGAGACTCCGAAGGCAAGGTCTCTACCCCCGCCTTTTATTCTCTTCTC
CCAGCTTGTACCTGGAATCTTGCTGGGAGCTCTCCCTCCCTTCCCCACAGCACGAACCTT
CCAGCTGTCAAGTTTGAAAAGAAGCCACTGTGCCTCCAGGGCCTCCTGCACCGGAGAGAG
AGGCTCTCTGCTCTGGGAGGCTGCTCCAGCGTCTCCCTCCCCGCCTGCATTCTCCATTCC
CTTAAATGGGCACCATCAGGGTGGCTGGCACAGCATGGGGCATGGGACGAGCACTGTGTG
TCTCCACTCCGTCACCAGGGACAGCCTTCCGGGGGTGAGGAGTGGGGGCCTCGCTCTGCA
ATTCCCAGGGCCAGATCTTTCCCATCCAAGCAATAATGGAAGGAGGGCCCAGGGCCAGGG
ACACTCAGGGACACTGTCGGGGCAGGGGCCCCCACATGGTAGTGTTTTTCTTTAGGAAGA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               3-840, gnl|bosTau2|chr29 (31247298-31248139)
               

               
               3-840, gnl|Hg17|chr11 (61034193-61035017)
               

               
               3-840, gnl|Mm7|chr19 (10136317-10135545)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-840, gnl|bosTau2|chr29 (31247298-31248139)
               

               
               3-840, gnl|Hg17|chr11 (61034193-61035017)
               

               
               3-840, gnl|Mm7|chr19 (10136317-10135545)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               csp (0.322373)
               

               
               ecc (0.115035)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               csp (0.322373)
               

               
               ecc (0.115035)

	3-840, gnl\|bosTau2\|chr29 (31247298-31248139)
	3-840, gnl\|Hg17\|chr11 (61034193-61035017)
	3-840, gnl\|Mm7\|chr19 (10136317-10135545)