Ss1.1-Mixn-0021j07.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GAGCAGGGTTTTGGAAATTTGCCCATCTGCATGGCCAAGACCCACCTATCTCTGTCTCAC CAACCTGACAAGAAAGGCGTACCCAAGGATTTCATTCTCCCCATCACTGACGTCCGGGCC AGCATAGGCGCTGGCTTCATTTACCCACTGGTTGGAACGATGAGCACCATGCCAGGACTG CCCACGCGGCCCTGCTTTTATGACATAGATCTGGACACGGAAACAGAGCAAGTTCAAGGC CTGTTTTGAATGAACAAGACATCGCAGGACCCAGTTCAGACTCCACCAACACAAACGCCT GCCTGCCTTTTTGCTGCAGTTGGAGAAGAAAATGAATTTGAAATATGCTGTTACGCAATG CCGGAGAAATGGCGAAATAGGCCAAGGATTTCTTCTTCGTTTGAGGCAAATTCTGTTGGC AGCAGAGTGTTCAGTAAAGGACCTCCACCAAGTCTGAAAGAAACTAATTTATTTTCTGTT TCTGCAGAGTTTACATTATTTCCCACCGCTTACACTTTAGAATGTTTATTTTATGGGAAC TGAGAGATTGGAAGAGTGTGAACTGAGAGGTAACATGTCCCACTATGGAGTTTTCTATTT TGTCTTTGAACTGAAAATAAACATGTATGCAGCAAACCAAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GAGCAGGGTTTTGGAAATTTGCCCATCTGCATGGCCAAGACCCACCTATCTCTGTCTCAC CAACCTGACAAGAAAGGCGTACCCAAGGATTTCATTCTCCCCATCACTGACGTCCGGGCC AGCATAGGCGCTGGCTTCATTTACCCACTGGTTGGAACGATGAGCACCATGCCAGGACTG CCCACGCGGCCCTGCTTTTATGACATAGATCTGGACACGGAAACAGAGCAAGTTCAAGGC CTGTTTTGAATGAACAAGACATCGCAGGACCCAGTTCAGACTCCACCAACACAAACGCCT GCCTGCCTTTTTGCTGCAGTTGGAGAAGAAAATGAATTTGAAATATGCTGTTACGCAATG CCGGAGAAATGGCGAAATAGGCCAAGGATTTCTTCTTCGTTTGAGGCAAATTCTGTTGGC AGCAGAGTGTTCAGTAAAGGACCTCCACCAAGTCTGAAAGAAACTAATTTATTTTCTGTT TCTGCAGAGTTTACATTATTTCCCACCGCTTACACTTTAGAATGTTTATTTTATGGGAAC TGAGAGATTGGAAGAGTGTGAACTGAGAGGTAACATGTCCCACTATGGAGTTTTCTATTT TGTCTTTGAACTGAAAATAAACATGTATGCAGCAAACCAAAAAAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 29 entry(ies) | More info |
| Aligned organism(s): 29 entry(ies) | Help | Less info |
| 4-164, gnl|bosTau2|chr10 (51650642-51650482) | |
| 4-164, gnl|canFam2|chr1 (32943167-32943275) | |
| 4-164, gnl|danRer3|chrNA (134483640-134483531) | |
| 4-164, gnl|dasNov1|scaffold_100970 (4099-3988) | |
| 4-164, gnl|echTel1|scaffold_297403 (132076-132185) | |
| 4-164, gnl|fr1|chrUn (59935167-59935058) | |
| 4-164, gnl|galGal2|chr5 (49696103-49696212) | |
| 4-164, gnl|Hg17|chr14 (63991191-63991351) | |
| 4-164, gnl|hg17|chrX (57302185-57302294) | |
| 4-164, gnl|loxAfr1|scaffold_2075 (43372-43263) | |
| 4-164, gnl|mm7|chr12 (74273287-74273178) | |
| 4-164, gnl|Mm7|chr12 (74273132-74273292) | |
| 4-164, gnl|monDom2|scaffold_8 (78134564-78134455) | |
| 4-164, gnl|oryCun1|scaffold_175969 (13387-13496) | |
| 4-164, gnl|panTro1|chrX (58726773-58726882) | |
| 4-164, gnl|rheMac2|chrX (55757723-55757832) | |
| 4-164, gnl|rn3|chr3 (116475649-116475553) | |
| 4-164, gnl|tetNig1|chr10 (3745813-3745704) | |
| 4-164, gnl|xenTro1|scaffold_421 (22558-22449) | |
| 275-640, gnl|bosTau2|chr9 (53152383-53152011) | |
| 275-640, gnl|canFam2|chr1 (44540579-44540843) | |
| 275-640, gnl|dasNov1|scaffold_68900 (8269-8546) | |
| 275-640, gnl|Hg17|chr6 (151514771-151515137) | |
| 275-640, gnl|hg17|chr8 (36285453-36285734) | |
| 275-640, gnl|mm7|chr10 (6191533-6191271) | |
| 275-640, gnl|Mm7|chr10 (6191532-6191066) | |
| 275-640, gnl|panTro1|chr7 (37489841-37490122) | |
| 275-640, gnl|rheMac2|chr8 (36689077-36689336) | |
| 275-640, gnl|rn3|chr1 (34883619-34883886) |
| Aligned organism(s): 29 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 4-164, gnl|bosTau2|chr10 (51650642-51650482) | |
| 4-164, gnl|canFam2|chr1 (32943167-32943275) | |
| 4-164, gnl|danRer3|chrNA (134483640-134483531) | |
| 4-164, gnl|dasNov1|scaffold_100970 (4099-3988) | |
| 4-164, gnl|echTel1|scaffold_297403 (132076-132185) | |
| 4-164, gnl|fr1|chrUn (59935167-59935058) | |
| 4-164, gnl|galGal2|chr5 (49696103-49696212) | |
| 4-164, gnl|Hg17|chr14 (63991191-63991351) | |
| 4-164, gnl|hg17|chrX (57302185-57302294) | |
| 4-164, gnl|loxAfr1|scaffold_2075 (43372-43263) | |
| 4-164, gnl|mm7|chr12 (74273287-74273178) | |
| 4-164, gnl|Mm7|chr12 (74273132-74273292) | |
| 4-164, gnl|monDom2|scaffold_8 (78134564-78134455) | |
| 4-164, gnl|oryCun1|scaffold_175969 (13387-13496) | |
| 4-164, gnl|panTro1|chrX (58726773-58726882) | |
| 4-164, gnl|rheMac2|chrX (55757723-55757832) | |
| 4-164, gnl|rn3|chr3 (116475649-116475553) | |
| 4-164, gnl|tetNig1|chr10 (3745813-3745704) | |
| 4-164, gnl|xenTro1|scaffold_421 (22558-22449) | |
| 275-640, gnl|bosTau2|chr9 (53152383-53152011) | |
| 275-640, gnl|canFam2|chr1 (44540579-44540843) | |
| 275-640, gnl|dasNov1|scaffold_68900 (8269-8546) | |
| 275-640, gnl|Hg17|chr6 (151514771-151515137) | |
| 275-640, gnl|hg17|chr8 (36285453-36285734) | |
| 275-640, gnl|mm7|chr10 (6191533-6191271) | |
| 275-640, gnl|Mm7|chr10 (6191532-6191066) | |
| 275-640, gnl|panTro1|chr7 (37489841-37490122) | |
| 275-640, gnl|rheMac2|chr8 (36689077-36689336) | |
| 275-640, gnl|rn3|chr1 (34883619-34883886) |
| Expressed library(ies): 6 entry(ies) | More info |
| Expressed library(ies): 6 entry(ies) | Help | Less info |
| ova (0.387397) | |
| aor (0.195274) | |
| fbs (0.175346) | |
| cut (0.169924) | |
| ste (0.135208) | |
| ldo (0.0970026) |
| Expressed library(ies): 6 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ova (0.387397) | |
| aor (0.195274) | |
| fbs (0.175346) | |
| cut (0.169924) | |
| ste (0.135208) | |
| ldo (0.0970026) |