Ss1.1-Mixn-0022b21.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GTACTTTTCACTTCCATTCTGTGTAGGGTCAAAAAAAAGTATCAGTCATTACCATGAAAC TCTGGGAGAAGCGCTTCAAGGAGTTGAATTGGAATTTAGTGGTCTGGATATTAAATTCAA AGATGACGTGATGCCAGCAACTTACTGTGAAATTGACTTAGATAAAGAAAAGAGAGATGC TTTTGTGTATGCTATCAAAAATCACTACTGGTACCAGATGTACATAGATGACTTACCAAT ATGGGGTATTGTTGGTGAAGCAGATGAAAATGGAGAAGATTACTATCTTTGGACCTATAA AAAACTTGAAATAGGTTTTAATGGAAATCGAATTGTTGATGTTAATCTAACTAGTGAAGG AAAGGTGAAACTAGTTCCCAATACTAAAATCCAGATGTCATATTCAGTAAAATGGAAAAA GTCAGATGTAAAATTTGAAGATCGATTCGACAAATATCTTGATCCATCCTTTTTTCAACA CAGGATTCACTGGTTTTCAATTTTCAACTCCTTCATGATGGTTATCTTCTTGGTGGGCTT AGTTTCAATGATTTTAATGAGGACTTTAAGAAAAGATTATGCCCGGTACAGTAAAGAAGA AGAAATGGATGACATGGATAGAGACCTAGGAGATGAGTATGGATGGAAGCAGGTGCATGG AGATGTATTTAGACCATCAAGTCACCCACTGATATTTTCCTCCCTCATTGGTTCTGGTTG TCAGATATTCGCTGTGTCTCTCATTGTTATTATTGTTGCAATGATAGAAGATTTGTATAC GGAGAGGGGGTCAATGCTCAGTACAGCCATATTTGTCTATGCTGCTACATCTCCAGTGAA TGGTTATTTTGGAGGAAGTCTGTATGCTAGACAAGGAGGAAGGAGATGGATAAAGCAGAT GTTCATTGGCGCGTTCCTCATCCCAGCTATGGTGTGTGGCACTGCCTTCTTCATCAATTT TATAGCCATTTATTACCATGCTTCAAGAGCCATTCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GTACTTTTCACTTCCATTCTGTGTAGGGTCAAAAAAAAGTATCAGTCATTACCATGAAAC TCTGGGAGAAGCGCTTCAAGGAGTTGAATTGGAATTTAGTGGTCTGGATATTAAATTCAA AGATGACGTGATGCCAGCAACTTACTGTGAAATTGACTTAGATAAAGAAAAGAGAGATGC TTTTGTGTATGCTATCAAAAATCACTACTGGTACCAGATGTACATAGATGACTTACCAAT ATGGGGTATTGTTGGTGAAGCAGATGAAAATGGAGAAGATTACTATCTTTGGACCTATAA AAAACTTGAAATAGGTTTTAATGGAAATCGAATTGTTGATGTTAATCTAACTAGTGAAGG AAAGGTGAAACTAGTTCCCAATACTAAAATCCAGATGTCATATTCAGTAAAATGGAAAAA GTCAGATGTAAAATTTGAAGATCGATTCGACAAATATCTTGATCCATCCTTTTTTCAACA CAGGATTCACTGGTTTTCAATTTTCAACTCCTTCATGATGGTTATCTTCTTGGTGGGCTT AGTTTCAATGATTTTAATGAGGACTTTAAGAAAAGATTATGCCCGGTACAGTAAAGAAGA AGAAATGGATGACATGGATAGAGACCTAGGAGATGAGTATGGATGGAAGCAGGTGCATGG AGATGTATTTAGACCATCAAGTCACCCACTGATATTTTCCTCCCTCATTGGTTCTGGTTG TCAGATATTCGCTGTGTCTCTCATTGTTATTATTGTTGCAATGATAGAAGATTTGTATAC GGAGAGGGGGTCAATGCTCAGTACAGCCATATTTGTCTATGCTGCTACATCTCCAGTGAA TGGTTATTTTGGAGGAAGTCTGTATGCTAGACAAGGAGGAAGGAGATGGATAAAGCAGAT GTTCATTGGCGCGTTCCTCATCCCAGCTATGGTGTGTGGCACTGCCTTCTTCATCAATTT TATAGCCATTTATTACCATGCTTCAAGAGCCATTCC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 44 entry(ies) | More info |
| Aligned organism(s): 44 entry(ies) | Help | Less info |
| 1-129, gnl|bosTau2|chr26 (8038512-8038385) | |
| 1-129, gnl|Hg17|chr10 (98326502-98326375) | |
| 1-129, gnl|Mm7|chr19 (41150105-41149978) | |
| 245-418, gnl|bosTau2|chr26 (8022703-8022529) | |
| 245-418, gnl|Hg17|chr10 (98311886-98311712) | |
| 245-418, gnl|Mm7|chr19 (41140643-41140469) | |
| 484-617, gnl|bosTau2|chr26 (8018632-8018499) | |
| 484-617, gnl|canFam2|chr28 (12936392-12936511) | |
| 484-617, gnl|danRer3|chr13 (7746112-7745994) | |
| 484-617, gnl|dasNov1|scaffold_196922 (195-76) | |
| 484-617, gnl|echTel1|scaffold_282850 (223-104) | |
| 484-617, gnl|fr1|chrUn (184930901-184931020) | |
| 484-617, gnl|galGal2|chr6 (15928452-15928571) | |
| 484-617, gnl|hg17|chr10 (98302671-98302790) | |
| 484-617, gnl|Hg17|chr10 (98302807-98302674) | |
| 484-617, gnl|loxAfr1|scaffold_10002 (36546-36665) | |
| 484-617, gnl|mm7|chr19 (41134412-41134531) | |
| 484-617, gnl|Mm7|chr19 (41134548-41134415) | |
| 484-617, gnl|monDom2|scaffold_14 (26096740-26096621) | |
| 484-617, gnl|oryCun1|scaffold_201949 (126-6) | |
| 484-617, gnl|panTro1|chr8 (99992772-99992891) | |
| 484-617, gnl|rheMac2|chr9 (96093420-96093539) | |
| 484-617, gnl|rn3|chr1 (246553187-246553306) | |
| 484-617, gnl|tetNig1|chr17 (533246-533127) | |
| 484-617, gnl|xenTro1|scaffold_1324 (20658-20777) | |
| 877-996, gnl|bosTau2|chr26 (8009450-8009331) | |
| 877-996, gnl|canFam2|chr28 (12927892-12928059) | |
| 877-996, gnl|danRer3|chr13 (7748701-7748518) | |
| 877-996, gnl|dasNov1|scaffold_308 (39954-40126) | |
| 877-996, gnl|echTel1|scaffold_282850 (9318-9152) | |
| 877-996, gnl|fr1|chrUn (184930117-184930280) | |
| 877-996, gnl|galGal2|chr6 (15923889-15924050) | |
| 877-996, gnl|hg17|chr10 (98293790-98293957) | |
| 877-996, gnl|Hg17|chr10 (98293955-98293836) | |
| 877-996, gnl|loxAfr1|scaffold_52685 (14770-14937) | |
| 877-996, gnl|mm7|chr19 (41126151-41126316) | |
| 877-996, gnl|Mm7|chr19 (41126314-41126195) | |
| 877-996, gnl|monDom2|scaffold_14 (26108471-26108288) | |
| 877-996, gnl|oryCun1|scaffold_175854 (10640-10807) | |
| 877-996, gnl|panTro1|chr8 (99983786-99983953) | |
| 877-996, gnl|rheMac2|chr9 (96084425-96084592) | |
| 877-996, gnl|rn3|chr1 (246544744-246544909) | |
| 877-996, gnl|tetNig1|chr17 (534227-534088) | |
| 877-996, gnl|xenTro1|scaffold_1324 (16354-16528) |
| Aligned organism(s): 44 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-129, gnl|bosTau2|chr26 (8038512-8038385) | |
| 1-129, gnl|Hg17|chr10 (98326502-98326375) | |
| 1-129, gnl|Mm7|chr19 (41150105-41149978) | |
| 245-418, gnl|bosTau2|chr26 (8022703-8022529) | |
| 245-418, gnl|Hg17|chr10 (98311886-98311712) | |
| 245-418, gnl|Mm7|chr19 (41140643-41140469) | |
| 484-617, gnl|bosTau2|chr26 (8018632-8018499) | |
| 484-617, gnl|canFam2|chr28 (12936392-12936511) | |
| 484-617, gnl|danRer3|chr13 (7746112-7745994) | |
| 484-617, gnl|dasNov1|scaffold_196922 (195-76) | |
| 484-617, gnl|echTel1|scaffold_282850 (223-104) | |
| 484-617, gnl|fr1|chrUn (184930901-184931020) | |
| 484-617, gnl|galGal2|chr6 (15928452-15928571) | |
| 484-617, gnl|hg17|chr10 (98302671-98302790) | |
| 484-617, gnl|Hg17|chr10 (98302807-98302674) | |
| 484-617, gnl|loxAfr1|scaffold_10002 (36546-36665) | |
| 484-617, gnl|mm7|chr19 (41134412-41134531) | |
| 484-617, gnl|Mm7|chr19 (41134548-41134415) | |
| 484-617, gnl|monDom2|scaffold_14 (26096740-26096621) | |
| 484-617, gnl|oryCun1|scaffold_201949 (126-6) | |
| 484-617, gnl|panTro1|chr8 (99992772-99992891) | |
| 484-617, gnl|rheMac2|chr9 (96093420-96093539) | |
| 484-617, gnl|rn3|chr1 (246553187-246553306) | |
| 484-617, gnl|tetNig1|chr17 (533246-533127) | |
| 484-617, gnl|xenTro1|scaffold_1324 (20658-20777) | |
| 877-996, gnl|bosTau2|chr26 (8009450-8009331) | |
| 877-996, gnl|canFam2|chr28 (12927892-12928059) | |
| 877-996, gnl|danRer3|chr13 (7748701-7748518) | |
| 877-996, gnl|dasNov1|scaffold_308 (39954-40126) | |
| 877-996, gnl|echTel1|scaffold_282850 (9318-9152) | |
| 877-996, gnl|fr1|chrUn (184930117-184930280) | |
| 877-996, gnl|galGal2|chr6 (15923889-15924050) | |
| 877-996, gnl|hg17|chr10 (98293790-98293957) | |
| 877-996, gnl|Hg17|chr10 (98293955-98293836) | |
| 877-996, gnl|loxAfr1|scaffold_52685 (14770-14937) | |
| 877-996, gnl|mm7|chr19 (41126151-41126316) | |
| 877-996, gnl|Mm7|chr19 (41126314-41126195) | |
| 877-996, gnl|monDom2|scaffold_14 (26108471-26108288) | |
| 877-996, gnl|oryCun1|scaffold_175854 (10640-10807) | |
| 877-996, gnl|panTro1|chr8 (99983786-99983953) | |
| 877-996, gnl|rheMac2|chr9 (96084425-96084592) | |
| 877-996, gnl|rn3|chr1 (246544744-246544909) | |
| 877-996, gnl|tetNig1|chr17 (534227-534088) | |
| 877-996, gnl|xenTro1|scaffold_1324 (16354-16528) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fty (0.17584) |