Ss1.1-Mixn-0022f09.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCATGGAACCCCGCAAGATGGAGAAGGGGACAGTGAAGAGGATAAAAGCTAAAGTTAAAA ATAAGAAGCAAGGATGTAAAAATGAGGAGGTGCTTGCTGTACTAGGCCATGAACTGGGGC ACTGGAAGTTGGGACACACGGTCAAAAATATTGTTATTAGCCAGGTGAATTCTTGGCTGT GTTTTTTCTTGTTTGCTGTATTAATTGGTCGAAAGGAGCTTTTTGTTGCATTTGGTTTTT ATGACAGCCAACCTACTCTAATTGGACTATTGATCATCTTCCAGTTTATTTTTTCACCTT ATAATGAGGTTCTTTCTTTTTGCCTAACCGTCCTAAGCCGCAGATTTGAGTTTCAAGCTG ATGCATTTGCCAAGAAACTTGGGAAGGCTAAAGACTTATATTCTGCTTTAATCAAACTAA ACAAAGATAACTTGGGATTCCCTGTTTCTGACTGGTTGTTTTCCATGTGGCATTATTCTC ATCCTCCACTACTAGAGAGACTTCAAGCTTTGAAAAATTCAAAACAAGACTGAGTTGCCC AGGGTCTGCGACTGAAGACGTTTCTGATTATTTCTGTCCTGGCAGCATGTTCTGGCTCTT GATGTTTTTAAACATTTTTTTTTT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCATGGAACCCCGCAAGATGGAGAAGGGGACAGTGAAGAGGATAAAAGCTAAAGTTAAAA ATAAGAAGCAAGGATGTAAAAATGAGGAGGTGCTTGCTGTACTAGGCCATGAACTGGGGC ACTGGAAGTTGGGACACACGGTCAAAAATATTGTTATTAGCCAGGTGAATTCTTGGCTGT GTTTTTTCTTGTTTGCTGTATTAATTGGTCGAAAGGAGCTTTTTGTTGCATTTGGTTTTT ATGACAGCCAACCTACTCTAATTGGACTATTGATCATCTTCCAGTTTATTTTTTCACCTT ATAATGAGGTTCTTTCTTTTTGCCTAACCGTCCTAAGCCGCAGATTTGAGTTTCAAGCTG ATGCATTTGCCAAGAAACTTGGGAAGGCTAAAGACTTATATTCTGCTTTAATCAAACTAA ACAAAGATAACTTGGGATTCCCTGTTTCTGACTGGTTGTTTTCCATGTGGCATTATTCTC ATCCTCCACTACTAGAGAGACTTCAAGCTTTGAAAAATTCAAAACAAGACTGAGTTGCCC AGGGTCTGCGACTGAAGACGTTTCTGATTATTTCTGTCCTGGCAGCATGTTCTGGCTCTT GATGTTTTTAAACATTTTTTTTTT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 35 entry(ies) | More info |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
| 55-173, gnl|bosTau2|chr3 (67869064-67869181) | |
| 55-173, gnl|canFam2|chr15 (5681918-5681754) | |
| 55-173, gnl|danRer3|chr17 (2826345-2826199) | |
| 55-173, gnl|dasNov1|scaffold_47159 (7842-7678) | |
| 55-173, gnl|fr1|chrUn (96882158-96881982) | |
| 55-173, gnl|galGal2|chr23 (1661019-1660887) | |
| 55-173, gnl|hg17|chr1 (40420664-40420826) | |
| 55-173, gnl|Hg17|chr1 (40420685-40420802) | |
| 55-173, gnl|loxAfr1|scaffold_6650 (80141-79980) | |
| 55-173, gnl|mm7|chr4 (120508818-120508662) | |
| 55-173, gnl|Mm7|chr4 (120508797-120508680) | |
| 55-173, gnl|monDom2|scaffold_43 (8767655-8767522) | |
| 55-173, gnl|panTro1|chr1 (41320678-41320840) | |
| 55-173, gnl|rheMac2|chr1 (43184886-43185049) | |
| 55-173, gnl|rn3|chr5 (141655084-141654915) | |
| 55-173, gnl|tetNig1|chr10 (6673238-6673366) | |
| 55-173, gnl|xenTro1|scaffold_439 (1079996-1080170) | |
| 289-624, gnl|bosTau2|chr3 (67873743-67874076) | |
| 289-624, gnl|canFam2|chr15 (5674980-5674726) | |
| 289-624, gnl|danRer3|chr17 (2823268-2823026) | |
| 289-624, gnl|echTel1|scaffold_265664 (1681-1426) | |
| 289-624, gnl|fr1|chrUn (96881730-96881476) | |
| 289-624, gnl|galGal2|chr23 (1659410-1659168) | |
| 289-624, gnl|hg17|chr1 (40427192-40427446) | |
| 289-624, gnl|Hg17|chr1 (40427192-40427522) | |
| 289-624, gnl|loxAfr1|scaffold_6004 (2765-2511) | |
| 289-624, gnl|mm7|chr4 (120501218-120500964) | |
| 289-624, gnl|Mm7|chr4 (120501216-120500890) | |
| 289-624, gnl|monDom2|scaffold_43 (8757122-8756861) | |
| 289-624, gnl|oryCun1|scaffold_120504 (4287-4546) | |
| 289-624, gnl|panTro1|chr1 (41327239-41327493) | |
| 289-624, gnl|rheMac2|chr1 (43191407-43191661) | |
| 289-624, gnl|rn3|chr5 (141650036-141649782) | |
| 289-624, gnl|tetNig1|chr10 (6673664-6673914) | |
| 289-624, gnl|xenTro1|scaffold_439 (1083704-1083945) |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 55-173, gnl|bosTau2|chr3 (67869064-67869181) | |
| 55-173, gnl|canFam2|chr15 (5681918-5681754) | |
| 55-173, gnl|danRer3|chr17 (2826345-2826199) | |
| 55-173, gnl|dasNov1|scaffold_47159 (7842-7678) | |
| 55-173, gnl|fr1|chrUn (96882158-96881982) | |
| 55-173, gnl|galGal2|chr23 (1661019-1660887) | |
| 55-173, gnl|hg17|chr1 (40420664-40420826) | |
| 55-173, gnl|Hg17|chr1 (40420685-40420802) | |
| 55-173, gnl|loxAfr1|scaffold_6650 (80141-79980) | |
| 55-173, gnl|mm7|chr4 (120508818-120508662) | |
| 55-173, gnl|Mm7|chr4 (120508797-120508680) | |
| 55-173, gnl|monDom2|scaffold_43 (8767655-8767522) | |
| 55-173, gnl|panTro1|chr1 (41320678-41320840) | |
| 55-173, gnl|rheMac2|chr1 (43184886-43185049) | |
| 55-173, gnl|rn3|chr5 (141655084-141654915) | |
| 55-173, gnl|tetNig1|chr10 (6673238-6673366) | |
| 55-173, gnl|xenTro1|scaffold_439 (1079996-1080170) | |
| 289-624, gnl|bosTau2|chr3 (67873743-67874076) | |
| 289-624, gnl|canFam2|chr15 (5674980-5674726) | |
| 289-624, gnl|danRer3|chr17 (2823268-2823026) | |
| 289-624, gnl|echTel1|scaffold_265664 (1681-1426) | |
| 289-624, gnl|fr1|chrUn (96881730-96881476) | |
| 289-624, gnl|galGal2|chr23 (1659410-1659168) | |
| 289-624, gnl|hg17|chr1 (40427192-40427446) | |
| 289-624, gnl|Hg17|chr1 (40427192-40427522) | |
| 289-624, gnl|loxAfr1|scaffold_6004 (2765-2511) | |
| 289-624, gnl|mm7|chr4 (120501218-120500964) | |
| 289-624, gnl|Mm7|chr4 (120501216-120500890) | |
| 289-624, gnl|monDom2|scaffold_43 (8757122-8756861) | |
| 289-624, gnl|oryCun1|scaffold_120504 (4287-4546) | |
| 289-624, gnl|panTro1|chr1 (41327239-41327493) | |
| 289-624, gnl|rheMac2|chr1 (43191407-43191661) | |
| 289-624, gnl|rn3|chr5 (141650036-141649782) | |
| 289-624, gnl|tetNig1|chr10 (6673664-6673914) | |
| 289-624, gnl|xenTro1|scaffold_439 (1083704-1083945) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fhi (0.169578) |