Non-Coding RNA Search

Ss1.1-Mixn-0022k18.5

Sequence:


               
               CCTGGGCGTCTTTGGCCGTCTGTAGCCAGTCTCGTGGTGGTTGTGTGTGACTGCCAGGCA
TCGGTCCCTGTCCTTGGGGCTCCCCCTTGTTGCCGACTTTCCTCCTCTGCCTCTCCCTCT
CCCCACAGCACAGCGCTGCCTCTGCCCGAAACTCTGCGCTCCGGGAGAGGTGGGAGGCCC
ACCCCCACCGCGTGTCATCTGTGGCTTTTGTGCCCGCGTGTCCGTCTGTCTCCTTTCCCT
GGTCTGTTGTGCCCCTGCTCACTCCTGGGCTCCTGGCCTGGGCGGACCCTGGCCTGCCCG
CCGCGTCTCCCTCTCTCTGCGGCCTGGGGTCCAGGGGGCAGGGGGACGGCTGAGCCCCTC
CTCAGCCCCCTGCCCTGGGCCTTCTCGGGAGCAGCTGAGCACGTGGCGTGGAGCTCCCGG
CCACAGCCCTCCGGCCCGCCAGCACGTCCAGAGCTTTGCTGTTGCCCCCTCACCCCTCCT
AGAAGTTTTTGCACAGAACTTCCCTTTGAAAAGTGTTTTTCTCATTCTCCATACCTCCCC
CAAACTCCTCCAGCCCTTCCCCCGGCTCAGCCCGCCGTCCGGAGCGTCTCCTGGGCCGTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCTGGGCGTCTTTGGCCGTCTGTAGCCAGTCTCGTGGTGGTTGTGTGTGACTGCCAGGCA
TCGGTCCCTGTCCTTGGGGCTCCCCCTTGTTGCCGACTTTCCTCCTCTGCCTCTCCCTCT
CCCCACAGCACAGCGCTGCCTCTGCCCGAAACTCTGCGCTCCGGGAGAGGTGGGAGGCCC
ACCCCCACCGCGTGTCATCTGTGGCTTTTGTGCCCGCGTGTCCGTCTGTCTCCTTTCCCT
GGTCTGTTGTGCCCCTGCTCACTCCTGGGCTCCTGGCCTGGGCGGACCCTGGCCTGCCCG
CCGCGTCTCCCTCTCTCTGCGGCCTGGGGTCCAGGGGGCAGGGGGACGGCTGAGCCCCTC
CTCAGCCCCCTGCCCTGGGCCTTCTCGGGAGCAGCTGAGCACGTGGCGTGGAGCTCCCGG
CCACAGCCCTCCGGCCCGCCAGCACGTCCAGAGCTTTGCTGTTGCCCCCTCACCCCTCCT
AGAAGTTTTTGCACAGAACTTCCCTTTGAAAAGTGTTTTTCTCATTCTCCATACCTCCCC
CAAACTCCTCCAGCCCTTCCCCCGGCTCAGCCCGCCGTCCGGAGCGTCTCCTGGGCCGTG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               154-600, gnl|bosTau2|chr29 (39849872-39850292)
               

               
               154-600, gnl|Hg17|chr11 (65768209-65768709)
               

               
               154-600, gnl|Mm7|chr19 (5029028-5028570)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               154-600, gnl|bosTau2|chr29 (39849872-39850292)
               

               
               154-600, gnl|Hg17|chr11 (65768209-65768709)
               

               
               154-600, gnl|Mm7|chr19 (5029028-5028570)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               ill (0.175593)
               

               
               eru (0.120048)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ill (0.175593)
               

               
               eru (0.120048)

	154-600, gnl\|bosTau2\|chr29 (39849872-39850292)
	154-600, gnl\|Hg17\|chr11 (65768209-65768709)
	154-600, gnl\|Mm7\|chr19 (5029028-5028570)