Ss1.1-Mixn-0022l10.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGCTGCGGCTGCTCCGGGACATCCAGCTGGCCGAGTTTTACCGACCCATCCTTGAGGCGC TTAATGTGACCCGGCCAGAGCACTTCGACTTTGTAAGACCCGAGGATCTGGATGGCATTG GCATGGGCCGGCCTGCCCAGCGCAGACTGGTTGAAGCCCTGAAGAGGCACCGTTCCGGGC TCAAGTCTAAGAACTGGGTCTATAAGATCCTTGGAGGTTTTGCCCCTGGGCAAAAGGAGA GCACCCCACCCTCAGACAGCCCTCCATCCCTCCCTGAGCCAGAAGGGGGACTCAAGTGTC TGATCCCAGATGGTGCCGTGTGCAGAGGGGAGCTTCTGGGCTCCGGCTGCTTTGGCGTGG TGCACCGGGGGCTGTGGACCCTGCCCAGTGGCCAGAGTATCCCAGTGGCTGTCAAGTCCC TCCGGGTGGGTCCCGAAGGCCCCGAGGGCACTGAGCTAGGGGACTTCCTGCGAGAAGTGT CCGTCATGATGAACTTGGAGCACTCACACGTGCTGCGTCTGCATGGCCTGGTACTGGGCC AGCCTCTGCAGATGGTGATGGAGCTGGCGCCCCTGGGCTCCCTGCACACGCGCCTGACCG CCCCGGCCCCCACACCCCCGCTGCCCGTGGCCCTGCTCTGCCTCTTCCTGCGGCAGGTGG CAGGGGCCATGGCGTACCTGGGGGCCCGCGGGCTGGTGCACCGAGACCTTGCCACGCGCA ACCTGCTGCTGGCCTCACCGCGCACGGTCAAGGTGG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGCTGCGGCTGCTCCGGGACATCCAGCTGGCCGAGTTTTACCGACCCATCCTTGAGGCGC TTAATGTGACCCGGCCAGAGCACTTCGACTTTGTAAGACCCGAGGATCTGGATGGCATTG GCATGGGCCGGCCTGCCCAGCGCAGACTGGTTGAAGCCCTGAAGAGGCACCGTTCCGGGC TCAAGTCTAAGAACTGGGTCTATAAGATCCTTGGAGGTTTTGCCCCTGGGCAAAAGGAGA GCACCCCACCCTCAGACAGCCCTCCATCCCTCCCTGAGCCAGAAGGGGGACTCAAGTGTC TGATCCCAGATGGTGCCGTGTGCAGAGGGGAGCTTCTGGGCTCCGGCTGCTTTGGCGTGG TGCACCGGGGGCTGTGGACCCTGCCCAGTGGCCAGAGTATCCCAGTGGCTGTCAAGTCCC TCCGGGTGGGTCCCGAAGGCCCCGAGGGCACTGAGCTAGGGGACTTCCTGCGAGAAGTGT CCGTCATGATGAACTTGGAGCACTCACACGTGCTGCGTCTGCATGGCCTGGTACTGGGCC AGCCTCTGCAGATGGTGATGGAGCTGGCGCCCCTGGGCTCCCTGCACACGCGCCTGACCG CCCCGGCCCCCACACCCCCGCTGCCCGTGGCCCTGCTCTGCCTCTTCCTGCGGCAGGTGG CAGGGGCCATGGCGTACCTGGGGGCCCGCGGGCTGGTGCACCGAGACCTTGCCACGCGCA ACCTGCTGCTGGCCTCACCGCGCACGGTCAAGGTGG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 1-135, gnl|bosTau2|chr19 (20861294-20861160) | |
| 1-135, gnl|canFam2|chr5 (35317959-35318083) | |
| 1-135, gnl|danRer3|chr7 (17382010-17382119) | |
| 1-135, gnl|dasNov1|scaffold_21063 (16905-16781) | |
| 1-135, gnl|echTel1|scaffold_310532 (54319-54218) | |
| 1-135, gnl|fr1|chrUn (11705661-11705553) | |
| 1-135, gnl|hg17|chr17 (7226970-7227094) | |
| 1-135, gnl|Hg17|chr17 (7226998-7227132) | |
| 1-135, gnl|loxAfr1|scaffold_38460 (12680-12556) | |
| 1-135, gnl|mm7|chr11 (69938650-69938526) | |
| 1-135, gnl|Mm7|chr11 (69938620-69938486) | |
| 1-135, gnl|oryCun1|scaffold_188985 (12684-12560) | |
| 1-135, gnl|panTro1|chr19_random (44522331-44522207) | |
| 1-135, gnl|rheMac2|chr16 (7109286-7109410) | |
| 1-135, gnl|rn3|chr10 (56712176-56712052) | |
| 1-135, gnl|tetNig1|chrUn_random (46623288-46623180) | |
| 1-135, gnl|xenTro1|scaffold_1329 (63687-63571) | |
| 205-396, gnl|bosTau2|chr19 (20860797-20860606) | |
| 205-396, gnl|Hg17|chr17 (7227466-7227657) | |
| 205-396, gnl|Mm7|chr11 (69938145-69937954) | |
| 554-756, gnl|bosTau2|chr19 (20860202-20860000) | |
| 554-756, gnl|canFam2|chr5 (35319079-35319319) | |
| 554-756, gnl|danRer3|chr7 (17385223-17385448) | |
| 554-756, gnl|dasNov1|scaffold_219830 (3332-3566) | |
| 554-756, gnl|echTel1|scaffold_310532 (53288-53049) | |
| 554-756, gnl|fr1|chrUn (11704780-11704547) | |
| 554-756, gnl|hg17|chr17 (7228001-7228244) | |
| 554-756, gnl|Hg17|chr17 (7228012-7228214) | |
| 554-756, gnl|loxAfr1|scaffold_38460 (11616-11377) | |
| 554-756, gnl|mm7|chr11 (69937387-69937148) | |
| 554-756, gnl|Mm7|chr11 (69937378-69937176) | |
| 554-756, gnl|monDom2|scaffold_66 (4350319-4350551) | |
| 554-756, gnl|oryCun1|scaffold_188985 (7071-6847) | |
| 554-756, gnl|panTro1|chr19_random (44521299-44521056) | |
| 554-756, gnl|rheMac2|chr16 (7110325-7110568) | |
| 554-756, gnl|rn3|chr10 (56710977-56710738) | |
| 554-756, gnl|tetNig1|chrUn_random (46622445-46622213) | |
| 554-756, gnl|xenTro1|scaffold_1329 (59715-59467) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-135, gnl|bosTau2|chr19 (20861294-20861160) | |
| 1-135, gnl|canFam2|chr5 (35317959-35318083) | |
| 1-135, gnl|danRer3|chr7 (17382010-17382119) | |
| 1-135, gnl|dasNov1|scaffold_21063 (16905-16781) | |
| 1-135, gnl|echTel1|scaffold_310532 (54319-54218) | |
| 1-135, gnl|fr1|chrUn (11705661-11705553) | |
| 1-135, gnl|hg17|chr17 (7226970-7227094) | |
| 1-135, gnl|Hg17|chr17 (7226998-7227132) | |
| 1-135, gnl|loxAfr1|scaffold_38460 (12680-12556) | |
| 1-135, gnl|mm7|chr11 (69938650-69938526) | |
| 1-135, gnl|Mm7|chr11 (69938620-69938486) | |
| 1-135, gnl|oryCun1|scaffold_188985 (12684-12560) | |
| 1-135, gnl|panTro1|chr19_random (44522331-44522207) | |
| 1-135, gnl|rheMac2|chr16 (7109286-7109410) | |
| 1-135, gnl|rn3|chr10 (56712176-56712052) | |
| 1-135, gnl|tetNig1|chrUn_random (46623288-46623180) | |
| 1-135, gnl|xenTro1|scaffold_1329 (63687-63571) | |
| 205-396, gnl|bosTau2|chr19 (20860797-20860606) | |
| 205-396, gnl|Hg17|chr17 (7227466-7227657) | |
| 205-396, gnl|Mm7|chr11 (69938145-69937954) | |
| 554-756, gnl|bosTau2|chr19 (20860202-20860000) | |
| 554-756, gnl|canFam2|chr5 (35319079-35319319) | |
| 554-756, gnl|danRer3|chr7 (17385223-17385448) | |
| 554-756, gnl|dasNov1|scaffold_219830 (3332-3566) | |
| 554-756, gnl|echTel1|scaffold_310532 (53288-53049) | |
| 554-756, gnl|fr1|chrUn (11704780-11704547) | |
| 554-756, gnl|hg17|chr17 (7228001-7228244) | |
| 554-756, gnl|Hg17|chr17 (7228012-7228214) | |
| 554-756, gnl|loxAfr1|scaffold_38460 (11616-11377) | |
| 554-756, gnl|mm7|chr11 (69937387-69937148) | |
| 554-756, gnl|Mm7|chr11 (69937378-69937176) | |
| 554-756, gnl|monDom2|scaffold_66 (4350319-4350551) | |
| 554-756, gnl|oryCun1|scaffold_188985 (7071-6847) | |
| 554-756, gnl|panTro1|chr19_random (44521299-44521056) | |
| 554-756, gnl|rheMac2|chr16 (7110325-7110568) | |
| 554-756, gnl|rn3|chr10 (56710977-56710738) | |
| 554-756, gnl|tetNig1|chrUn_random (46622445-46622213) | |
| 554-756, gnl|xenTro1|scaffold_1329 (59715-59467) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| pla (0.133672) |