Ss1.1-Mixn-0023j03.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGAAGCGGTTTGCAGCGCGGCGGCGGCGGCGGCGTTGAGTGTTGGCCCGCCAGTCCGGTC GGGGTGTGCAGTAGGACGGACGAGCAGCGCGTCGCTGTCCCCCGGCGGCTGGAGATGTCC GAGCCCAAGGCAATTGATCCCAAGTTGTCGACGACCGACAGGGTGGTGAAAGCTGTCCCA TTTCCTCCAAGTCACCGGCTTACAGCCAAAGAAGTGTTTGATAACGATGGGAAACCTCGT GTGGATATCTTAAAGGCACATCTCATGAAGGAGGGAAGGCTGGAAGAGAATGTTGCATTG AGAATAATAACAGAGGGGGCTTCAATTCTTCGACAGGAAAAGAATTTGCTGGATATTGAT GCACCAGTCACAGTTTGTGGGGACATCCATGGACAATTCTTTGACTTGATGAAACTCTTT GAAGTGGGGGGATCTCCTGCCAACACTCGCTACCTCTTCTTAGGGGACTATGTTGACAGA GGGTACTTCAGTATCGAATGTGTGCTGTACTTGTGGGCTTTGAAAATTCTTTACCCCAAA ACACTGTTTTTACTTCGTGGAAATCATGAATGTAGACATCTAACAGAGTATTTCACATTT AAACAAGAATGTAAAATTAAGTATTCAGAACACGTATATGATGCCTGCATGGATGCCTTT GACTGCCTCCCACTGGCTGCCCTGATGAACCAGCAGTTCCTGTGTGTCCACGGTGGTTTG TCTCCAGAGATTAACACTTTAGATGATATCAGAAAATTAGACCGATTCAAGGAACCACCT GCTTATGGACCTATGTGTGACATCCTGTGGTCAGACCCCCTGGAGGATTGTGGAAATGAG AAGACTCAGGAACATTTCACTCACAACACAGTCAGGGGGTGTTCATACTTCTACAGTTAC CCGGCTGTATGTGAATTCTTACAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGAAGCGGTTTGCAGCGCGGCGGCGGCGGCGGCGTTGAGTGTTGGCCCGCCAGTCCGGTC GGGGTGTGCAGTAGGACGGACGAGCAGCGCGTCGCTGTCCCCCGGCGGCTGGAGATGTCC GAGCCCAAGGCAATTGATCCCAAGTTGTCGACGACCGACAGGGTGGTGAAAGCTGTCCCA TTTCCTCCAAGTCACCGGCTTACAGCCAAAGAAGTGTTTGATAACGATGGGAAACCTCGT GTGGATATCTTAAAGGCACATCTCATGAAGGAGGGAAGGCTGGAAGAGAATGTTGCATTG AGAATAATAACAGAGGGGGCTTCAATTCTTCGACAGGAAAAGAATTTGCTGGATATTGAT GCACCAGTCACAGTTTGTGGGGACATCCATGGACAATTCTTTGACTTGATGAAACTCTTT GAAGTGGGGGGATCTCCTGCCAACACTCGCTACCTCTTCTTAGGGGACTATGTTGACAGA GGGTACTTCAGTATCGAATGTGTGCTGTACTTGTGGGCTTTGAAAATTCTTTACCCCAAA ACACTGTTTTTACTTCGTGGAAATCATGAATGTAGACATCTAACAGAGTATTTCACATTT AAACAAGAATGTAAAATTAAGTATTCAGAACACGTATATGATGCCTGCATGGATGCCTTT GACTGCCTCCCACTGGCTGCCCTGATGAACCAGCAGTTCCTGTGTGTCCACGGTGGTTTG TCTCCAGAGATTAACACTTTAGATGATATCAGAAAATTAGACCGATTCAAGGAACCACCT GCTTATGGACCTATGTGTGACATCCTGTGGTCAGACCCCCTGGAGGATTGTGGAAATGAG AAGACTCAGGAACATTTCACTCACAACACAGTCAGGGGGTGTTCATACTTCTACAGTTAC CCGGCTGTATGTGAATTCTTACAG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 171-373, gnl|bosTau2|chr15 (41632288-41632086) | |
| 171-373, gnl|canFam2|chr32 (25771335-25771578) | |
| 171-373, gnl|danRer3|chr14 (3247819-3247595) | |
| 171-373, gnl|dasNov1|scaffold_415 (126308-126551) | |
| 171-373, gnl|echTel1|scaffold_308686 (47566-47811) | |
| 171-373, gnl|fr1|chrUn (321177919-321178161) | |
| 171-373, gnl|galGal2|chr4 (60912500-60912745) | |
| 171-373, gnl|hg17|chr4 (102474241-102474484) | |
| 171-373, gnl|Hg17|chr4 (102474453-102474251) | |
| 171-373, gnl|loxAfr1|scaffold_14591 (9111-9355) | |
| 171-373, gnl|mm7|chr3 (136592197-136591956) | |
| 171-373, gnl|Mm7|chr3 (136591983-136592185) | |
| 171-373, gnl|monDom2|scaffold_37 (11137710-11137467) | |
| 171-373, gnl|oryCun1|scaffold_197764 (409-166) | |
| 171-373, gnl|panTro1|chr3 (118858076-118858319) | |
| 171-373, gnl|rheMac2|chr5 (94158304-94158548) | |
| 171-373, gnl|rn3|chr2 (234248122-234247882) | |
| 171-373, gnl|tetNig1|chr7 (4047650-4047436) | |
| 171-373, gnl|xenTro1|scaffold_326 (923876-923637) | |
| 608-759, gnl|bosTau2|chr15 (41546995-41546844) | |
| 608-759, gnl|canFam2|chr32 (25680078-25680239) | |
| 608-759, gnl|danRer3|chr5 (21722717-21722564) | |
| 608-759, gnl|dasNov1|scaffold_88354 (8266-8113) | |
| 608-759, gnl|echTel1|scaffold_310608 (107576-107416) | |
| 608-759, gnl|fr1|chrUn (4947314-4947464) | |
| 608-759, gnl|galGal2|chr4 (60830539-60830698) | |
| 608-759, gnl|hg17|chr4 (102376697-102376857) | |
| 608-759, gnl|Hg17|chr4 (102376850-102376699) | |
| 608-759, gnl|loxAfr1|scaffold_18441 (16712-16552) | |
| 608-759, gnl|mm7|chr3 (136672041-136671881) | |
| 608-759, gnl|Mm7|chr3 (136671886-136672037) | |
| 608-759, gnl|monDom2|scaffold_37 (11271752-11271592) | |
| 608-759, gnl|oryCun1|scaffold_213494 (139480-139320) | |
| 608-759, gnl|panTro1|chr3 (118760740-118760900) | |
| 608-759, gnl|rheMac2|chr5 (94061847-94062007) | |
| 608-759, gnl|rn3|chr2 (234329575-234329415) | |
| 608-759, gnl|tetNig1|chrUn_random (43851896-43851743) | |
| 608-759, gnl|xenTro1|scaffold_326 (942943-942783) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 171-373, gnl|bosTau2|chr15 (41632288-41632086) | |
| 171-373, gnl|canFam2|chr32 (25771335-25771578) | |
| 171-373, gnl|danRer3|chr14 (3247819-3247595) | |
| 171-373, gnl|dasNov1|scaffold_415 (126308-126551) | |
| 171-373, gnl|echTel1|scaffold_308686 (47566-47811) | |
| 171-373, gnl|fr1|chrUn (321177919-321178161) | |
| 171-373, gnl|galGal2|chr4 (60912500-60912745) | |
| 171-373, gnl|hg17|chr4 (102474241-102474484) | |
| 171-373, gnl|Hg17|chr4 (102474453-102474251) | |
| 171-373, gnl|loxAfr1|scaffold_14591 (9111-9355) | |
| 171-373, gnl|mm7|chr3 (136592197-136591956) | |
| 171-373, gnl|Mm7|chr3 (136591983-136592185) | |
| 171-373, gnl|monDom2|scaffold_37 (11137710-11137467) | |
| 171-373, gnl|oryCun1|scaffold_197764 (409-166) | |
| 171-373, gnl|panTro1|chr3 (118858076-118858319) | |
| 171-373, gnl|rheMac2|chr5 (94158304-94158548) | |
| 171-373, gnl|rn3|chr2 (234248122-234247882) | |
| 171-373, gnl|tetNig1|chr7 (4047650-4047436) | |
| 171-373, gnl|xenTro1|scaffold_326 (923876-923637) | |
| 608-759, gnl|bosTau2|chr15 (41546995-41546844) | |
| 608-759, gnl|canFam2|chr32 (25680078-25680239) | |
| 608-759, gnl|danRer3|chr5 (21722717-21722564) | |
| 608-759, gnl|dasNov1|scaffold_88354 (8266-8113) | |
| 608-759, gnl|echTel1|scaffold_310608 (107576-107416) | |
| 608-759, gnl|fr1|chrUn (4947314-4947464) | |
| 608-759, gnl|galGal2|chr4 (60830539-60830698) | |
| 608-759, gnl|hg17|chr4 (102376697-102376857) | |
| 608-759, gnl|Hg17|chr4 (102376850-102376699) | |
| 608-759, gnl|loxAfr1|scaffold_18441 (16712-16552) | |
| 608-759, gnl|mm7|chr3 (136672041-136671881) | |
| 608-759, gnl|Mm7|chr3 (136671886-136672037) | |
| 608-759, gnl|monDom2|scaffold_37 (11271752-11271592) | |
| 608-759, gnl|oryCun1|scaffold_213494 (139480-139320) | |
| 608-759, gnl|panTro1|chr3 (118760740-118760900) | |
| 608-759, gnl|rheMac2|chr5 (94061847-94062007) | |
| 608-759, gnl|rn3|chr2 (234329575-234329415) | |
| 608-759, gnl|tetNig1|chrUn_random (43851896-43851743) | |
| 608-759, gnl|xenTro1|scaffold_326 (942943-942783) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cty (0.10408) |