Non-Coding RNA Search

Ss1.1-Mixn-0023n07.5

Sequence:


               
               CAAGGATTAATTCACAAGATGAATGGAGACCTGCTGCAAGCAGCCGCATGCTATGAGAAG
GAACTGGGCTACCTACTAAGGAACAGCCCTTCAGGCATAGGCAGCATTTTCCAGCCAGCA
TCTGAGCTGGAAGAAGGCACTGAGGAAATGGACCAGGGTGCAGATGGCTCTACTCTCAGG
GAGCTTCCTGACCCTGGGGCTGACAGAGACAGGAAGGAAAGGAAAGGAACAGAGAGTCAG
GGCGCCTGGAATAGTGGCTGAGAAGGGGAGGAGAGTGGGAAGGCAGGAGTTCCCCAGTCT
GAAATTGCCAAGCAAGAGGGTCCTGCTTGTTGCTTTGAGGCATATTTTTAGAGAGCTGTT
TTCTCATGTCTGTCTTCCCTGTCCTTATCAGCCACTACACAGTTCTCTAGTCTGCAGGTT
TTAGAAAGAACTACTACTAGAATCAGTGCTTCAGGTCTGCATGATGCACTCAGTTCTCCA
GAAAGCCTTCATTTCTGCCCTTCTTGCCAAGGTCATAACTGGAGATTACCAACAAACAGA
ATCTCATGTCTTTCACCCAACTGTTCTCCAGCCTTCTGCGCCTTCTGGAAGACTAGCTTT
TGGGGAATCCTGGAATATTCCCTAAGTCTTATCCTTGGCTTCAGCCATGTACGTATATGT
ATTTTTGATAGTGATATTACAATAAATATTCTTACAGTAATGCTACAATAAATTCTAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAAGGATTAATTCACAAGATGAATGGAGACCTGCTGCAAGCAGCCGCATGCTATGAGAAG
GAACTGGGCTACCTACTAAGGAACAGCCCTTCAGGCATAGGCAGCATTTTCCAGCCAGCA
TCTGAGCTGGAAGAAGGCACTGAGGAAATGGACCAGGGTGCAGATGGCTCTACTCTCAGG
GAGCTTCCTGACCCTGGGGCTGACAGAGACAGGAAGGAAAGGAAAGGAACAGAGAGTCAG
GGCGCCTGGAATAGTGGCTGAGAAGGGGAGGAGAGTGGGAAGGCAGGAGTTCCCCAGTCT
GAAATTGCCAAGCAAGAGGGTCCTGCTTGTTGCTTTGAGGCATATTTTTAGAGAGCTGTT
TTCTCATGTCTGTCTTCCCTGTCCTTATCAGCCACTACACAGTTCTCTAGTCTGCAGGTT
TTAGAAAGAACTACTACTAGAATCAGTGCTTCAGGTCTGCATGATGCACTCAGTTCTCCA
GAAAGCCTTCATTTCTGCCCTTCTTGCCAAGGTCATAACTGGAGATTACCAACAAACAGA
ATCTCATGTCTTTCACCCAACTGTTCTCCAGCCTTCTGCGCCTTCTGGAAGACTAGCTTT
TGGGGAATCCTGGAATATTCCCTAAGTCTTATCCTTGGCTTCAGCCATGTACGTATATGT
ATTTTTGATAGTGATATTACAATAAATATTCTTACAGTAATGCTACAATAAATTCTAAAA

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               1-689, gnl|bosTau2|chr26 (7324714-7324061)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-689, gnl|bosTau2|chr26 (7324714-7324061)

Expressed library(ies): 5 entry(ies)

More info

Expressed library(ies): 5 entry(ies)

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               cga (0.279096)
               

               
               sin (0.174948)
               

               
               cje (0.165235)
               

               
               cag (0.151194)
               

               
               nmm (0.132802)

Expressed library(ies): 5 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cga (0.279096)
               

               
               sin (0.174948)
               

               
               cje (0.165235)
               

               
               cag (0.151194)
               

               
               nmm (0.132802)

	cga (0.279096)
	sin (0.174948)
	cje (0.165235)
	cag (0.151194)
	nmm (0.132802)