Non-Coding RNA Search

Ss1.1-Mixn-0023o07.5

Sequence:


               
               GGAGAGGCCAGCAGGTGGCATGAACCTGGCGGACGAGGAGGAGGACCAGGTGGCTTTCAC
CCCAGGCTCCAATTTTAACATCATGCCCAGCCTTGTAGGTCTGGGGGCAATTATCATAAT
AAACTATGAAATATGGTAATTTGAGGAATGGAATTTGGCATAAACTCTGGAGGGTGTCTT
CAACCTGCTATTTCTGGGGATAAAATGACTTGGCCATGATGTACAAGAAAACGCTCCTCA
TTGGCCTCCTGGCTGGACCAAAGAGCAGCAGAGCAAGAACCAGTGTTGGCAGCTGAACTG
ATTGGAGGCTCTTTTGTAAAGGGGCATCCGTGGCAAAGGGCCATGTGCTGTGCAAGCTGA
AGAGCATGCAGATCAACAGATCGGACCCTTTCTAAAACTTCAGACCATCAGGGACTTTTT
CGTGGACTTCTCTTAATGGTTAAGAACCTGGTGTAGGGGAATAATTCTCCCTGGATAAGT
GTTGACCTACAGTTTCTGCGAGTCACACACCAGCAATGGGTCCAGAGTCCTGGGTTGAAT
TCTGTTTACAGACTGACCCATAGATGGGAATAAACAGGATCCAAGGCAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGAGAGGCCAGCAGGTGGCATGAACCTGGCGGACGAGGAGGAGGACCAGGTGGCTTTCAC
CCCAGGCTCCAATTTTAACATCATGCCCAGCCTTGTAGGTCTGGGGGCAATTATCATAAT
AAACTATGAAATATGGTAATTTGAGGAATGGAATTTGGCATAAACTCTGGAGGGTGTCTT
CAACCTGCTATTTCTGGGGATAAAATGACTTGGCCATGATGTACAAGAAAACGCTCCTCA
TTGGCCTCCTGGCTGGACCAAAGAGCAGCAGAGCAAGAACCAGTGTTGGCAGCTGAACTG
ATTGGAGGCTCTTTTGTAAAGGGGCATCCGTGGCAAAGGGCCATGTGCTGTGCAAGCTGA
AGAGCATGCAGATCAACAGATCGGACCCTTTCTAAAACTTCAGACCATCAGGGACTTTTT
CGTGGACTTCTCTTAATGGTTAAGAACCTGGTGTAGGGGAATAATTCTCCCTGGATAAGT
GTTGACCTACAGTTTCTGCGAGTCACACACCAGCAATGGGTCCAGAGTCCTGGGTTGAAT
TCTGTTTACAGACTGACCCATAGATGGGAATAAACAGGATCCAAGGCAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               178-548, gnl|bosTau2|chr26 (16481655-16482038)
               

               
               178-548, gnl|Hg17|chr10 (105632239-105631863)
               

               
               178-548, gnl|Mm7|chr19 (47401927-47401568)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               178-548, gnl|bosTau2|chr26 (16481655-16482038)
               

               
               178-548, gnl|Hg17|chr10 (105632239-105631863)
               

               
               178-548, gnl|Mm7|chr19 (47401927-47401568)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               fcc (0.197785)
               

               
               lnt (0.142308)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fcc (0.197785)
               

               
               lnt (0.142308)

	178-548, gnl\|bosTau2\|chr26 (16481655-16482038)
	178-548, gnl\|Hg17\|chr10 (105632239-105631863)
	178-548, gnl\|Mm7\|chr19 (47401927-47401568)