Non-Coding RNA Search

Ss1.1-Mixn-0024a04.5

Sequence:


               
               TTTTTTTTTTTTTTTTTTATTATTATTTGCGTTTGTTAAATTCTTTTTATTATTTTTATT
ATTTTACTTCCTTCTTGGAAAAGGTGGCTCGGATCAGAGCCTCAGAGAGGGACGCAAAAT
GCTCCCTGGTCTCCCGGCAGGGGGCGGGAGCCTGTCCTCGACCCCAAGCCAGTCAAACTT
CCCTGAGCGGTTGTGAGGGGTCCGGCGGCGGCAGGGGAGCCCCCTGTGCGCTGGGCTTCT
AAATATGGCTCTCCTCCGCGCCTCATTGTCCGCACTTTAGGGCGGTGGTCCCCCGCCTTG
CATTCGCATTTCCCCGGTTCACCACCCCCAAAGCCCTGGGGGCCGCGCCTCCTCTCCTCC
CCCGAGCTCTCCCCGGCGCTTTAAATAATGATATTTGCATGCAGGGAGCGATTCATAAAT
ATGTCAGGACCGGTGAAATATAGGCAACATTTCAAACTTTCTATTTAAAAAACATGAATT
ATGGCCGCGGAAAATGTGTTCCCATTTAAAGGCGATACGAAGTATTTGGTGTCTCGTCCC
CGGGCCCATCCATCACGCAGACAATAAAGAGAGTTTTTCGCCCTGACACCCGCGATTTAT
GGGCGCCCTTCTCTGCCCTCATCACTCACCCGCCGCGGTCGGCCAGGCGACAGGCCCCGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTTTTTTTTTTTTTTTATTATTATTTGCGTTTGTTAAATTCTTTTTATTATTTTTATT
ATTTTACTTCCTTCTTGGAAAAGGTGGCTCGGATCAGAGCCTCAGAGAGGGACGCAAAAT
GCTCCCTGGTCTCCCGGCAGGGGGCGGGAGCCTGTCCTCGACCCCAAGCCAGTCAAACTT
CCCTGAGCGGTTGTGAGGGGTCCGGCGGCGGCAGGGGAGCCCCCTGTGCGCTGGGCTTCT
AAATATGGCTCTCCTCCGCGCCTCATTGTCCGCACTTTAGGGCGGTGGTCCCCCGCCTTG
CATTCGCATTTCCCCGGTTCACCACCCCCAAAGCCCTGGGGGCCGCGCCTCCTCTCCTCC
CCCGAGCTCTCCCCGGCGCTTTAAATAATGATATTTGCATGCAGGGAGCGATTCATAAAT
ATGTCAGGACCGGTGAAATATAGGCAACATTTCAAACTTTCTATTTAAAAAACATGAATT
ATGGCCGCGGAAAATGTGTTCCCATTTAAAGGCGATACGAAGTATTTGGTGTCTCGTCCC
CGGGCCCATCCATCACGCAGACAATAAAGAGAGTTTTTCGCCCTGACACCCGCGATTTAT
GGGCGCCCTTCTCTGCCCTCATCACTCACCCGCCGCGGTCGGCCAGGCGACAGGCCCCGT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               12-659, gnl|bosTau2|chr6 (36208162-36208789)
               

               
               12-659, gnl|Hg17|chr10 (76838726-76838084)
               

               
               12-659, gnl|Mm7|chr14 (19653722-19653070)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               12-659, gnl|bosTau2|chr6 (36208162-36208789)
               

               
               12-659, gnl|Hg17|chr10 (76838726-76838084)
               

               
               12-659, gnl|Mm7|chr14 (19653722-19653070)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               elu (0.385356)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               elu (0.385356)

	12-659, gnl\|bosTau2\|chr6 (36208162-36208789)
	12-659, gnl\|Hg17\|chr10 (76838726-76838084)
	12-659, gnl\|Mm7\|chr14 (19653722-19653070)