Non-Coding RNA Search

Ss1.1-Mixn-0024c18.5

Sequence:


               
               ACCGAGGCGCGCACCTGCGAGGCCGTGGCCGCACCGTGTACAACACCTTCCGGGCCGCAG
CGCCCCCGCCCCCGATCCCGGCCTATGGCGGTGTTGTTTACCAGGATGGATTTTATGGTG
CAGACATTTATGGTGGTTATGCTGCGTACCGCTACGCCCAGCCCACCCCCGCCACTGCCG
CTGCCTACAGTGTGCTGCGTACCGCTACGCCCAGCCCACCCCCGCCACTGCCGCTGCCTA
CAGTGACAGTTACGGACGAGTTTATGCTACCGACCCCTACCACCACACACTTGCTCCAGC
CCCCACCTACGGCGTTGGTGCCATGAATGCTTTTGCACCCTTGACTGATGCCAAGACTAG
GAGCCATGCTGATGATGTGGGTCTCGTTCTTTCTTCATTGCAGGCTAGTATATACCGAGG
GGGATACAACCGTTTTGCTCCATACTAAATGACAAAACCATAAAAACCTTCCAATGTGGG
GAGAAAGGAAGCTTTCCGAGGCCTGGGTATTGCAATACATGCAGTCGTGCATCATTTTAG
CATCTAAAAAAAATAAAAAATAAAAAGAGGAAAAAAATTACATTTTTTATCTTATACCTC
AGATATTTTGTTCTGTGTATTTTAATATTGTGGGTCTTTCATTTCCGAAGGTTCCGTAGT
TTGGTTGCTGGCTGTAGGAGTTTTTGTGGTTGATCTAGAGAGATGCTAGCTATGAATAAA
AACTGGTGTAGGGCCATATTCAGAGTGCTATATCCTGTAAATGAATTCTACATGCTGAAG
ATGAAGCTACTGGGGTGATCAGCTGTTTGGGAAGAGTGTAAGTGACTACAGGGGTCGTGT
TTTTTCCTGCATCTGCATTATTTTATTTTGTGAAGGGGGACGGGTGGGAGGGACCTAGGG
GATTGGGACTGGGGTTTGGCTGAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACCGAGGCGCGCACCTGCGAGGCCGTGGCCGCACCGTGTACAACACCTTCCGGGCCGCAG
CGCCCCCGCCCCCGATCCCGGCCTATGGCGGTGTTGTTTACCAGGATGGATTTTATGGTG
CAGACATTTATGGTGGTTATGCTGCGTACCGCTACGCCCAGCCCACCCCCGCCACTGCCG
CTGCCTACAGTGTGCTGCGTACCGCTACGCCCAGCCCACCCCCGCCACTGCCGCTGCCTA
CAGTGACAGTTACGGACGAGTTTATGCTACCGACCCCTACCACCACACACTTGCTCCAGC
CCCCACCTACGGCGTTGGTGCCATGAATGCTTTTGCACCCTTGACTGATGCCAAGACTAG
GAGCCATGCTGATGATGTGGGTCTCGTTCTTTCTTCATTGCAGGCTAGTATATACCGAGG
GGGATACAACCGTTTTGCTCCATACTAAATGACAAAACCATAAAAACCTTCCAATGTGGG
GAGAAAGGAAGCTTTCCGAGGCCTGGGTATTGCAATACATGCAGTCGTGCATCATTTTAG
CATCTAAAAAAAATAAAAAATAAAAAGAGGAAAAAAATTACATTTTTTATCTTATACCTC
AGATATTTTGTTCTGTGTATTTTAATATTGTGGGTCTTTCATTTCCGAAGGTTCCGTAGT
TTGGTTGCTGGCTGTAGGAGTTTTTGTGGTTGATCTAGAGAGATGCTAGCTATGAATAAA
AACTGGTGTAGGGCCATATTCAGAGTGCTATATCCTGTAAATGAATTCTACATGCTGAAG
ATGAAGCTACTGGGGTGATCAGCTGTTTGGGAAGAGTGTAAGTGACTACAGGGGTCGTGT
TTTTTCCTGCATCTGCATTATTTTATTTTGTGAAGGGGGACGGGTGGGAGGGACCTAGGG
GATTGGGACTGGGGTTTGGCTGAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               325-924, gnl|bosTau2|chr25 (6201022-6201657)
               

               
               325-924, gnl|Hg17|chr16 (7700625-7701228)
               

               
               325-924, gnl|Mm7|chr16 (7082932-7083560)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               325-924, gnl|bosTau2|chr25 (6201022-6201657)
               

               
               325-924, gnl|Hg17|chr16 (7700625-7701228)
               

               
               325-924, gnl|Mm7|chr16 (7082932-7083560)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ldo (0.0970026)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ldo (0.0970026)

	325-924, gnl\|bosTau2\|chr25 (6201022-6201657)
	325-924, gnl\|Hg17\|chr16 (7700625-7701228)
	325-924, gnl\|Mm7\|chr16 (7082932-7083560)