Non-Coding RNA Search

Ss1.1-Mixn-0024h20.5

Sequence:


               
               GCCGCCGCTGCTGTCATCCCCGCCGTGTCCACGCCGCCACCTTTCCAGGGCCGCCCCATA
ACTCCAGTGTACACGGTGGCTCCAAACGTTCAGAGAATTCCCACTGCCGGGATCTACGGG
GCCAGTTACGTGCCATTTGCTGCTCCCGCCACAGCCACAATCGCCACACTACAGAAGAAC
GCGGCGGCCACGGCCGCCGTCTACGGCGGATACGCAGGCTACATACCTCAGGCCTTCCCT
GCCGCCGCCATCCAGGTCCCCATCCACGACGTCTACCAGACCTACTGAGACCCGCCGGGA
CCCGCCCCGCCGCCGCCGCCGCCGCTGAAGGAACTTTCCTATTTATGAAGAACGTGCTGG
GTTAGCGCACGCGAAACCTGACCGTGAAGAATGTTATCAGCTACCCTACTGGAATATTTT
ATATACATGAAGTTTTCACTAGTTTTTTAAGACTGTTTTCACTTTAGCAGGAGGCCTGTG
CTCATACATTTCCGAGAGACTTAACAATGGGTTGTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCCGCCGCTGCTGTCATCCCCGCCGTGTCCACGCCGCCACCTTTCCAGGGCCGCCCCATA
ACTCCAGTGTACACGGTGGCTCCAAACGTTCAGAGAATTCCCACTGCCGGGATCTACGGG
GCCAGTTACGTGCCATTTGCTGCTCCCGCCACAGCCACAATCGCCACACTACAGAAGAAC
GCGGCGGCCACGGCCGCCGTCTACGGCGGATACGCAGGCTACATACCTCAGGCCTTCCCT
GCCGCCGCCATCCAGGTCCCCATCCACGACGTCTACCAGACCTACTGAGACCCGCCGGGA
CCCGCCCCGCCGCCGCCGCCGCCGCTGAAGGAACTTTCCTATTTATGAAGAACGTGCTGG
GTTAGCGCACGCGAAACCTGACCGTGAAGAATGTTATCAGCTACCCTACTGGAATATTTT
ATATACATGAAGTTTTCACTAGTTTTTTAAGACTGTTTTCACTTTAGCAGGAGGCCTGTG
CTCATACATTTCCGAGAGACTTAACAATGGGTTGTG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61884535|ref|XP_594520.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61884535|ref|XP_594520.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               46-516, gnl|bosTau2|chr6 (31242606-31242154)
               

               
               46-516, gnl|Hg17|chr4 (40269091-40268618)
               

               
               46-516, gnl|Mm7|chr5 (65374250-65373754)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               46-516, gnl|bosTau2|chr6 (31242606-31242154)
               

               
               46-516, gnl|Hg17|chr4 (40269091-40268618)
               

               
               46-516, gnl|Mm7|chr5 (65374250-65373754)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cte (0.29274)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cte (0.29274)

	46-516, gnl\|bosTau2\|chr6 (31242606-31242154)
	46-516, gnl\|Hg17\|chr4 (40269091-40268618)
	46-516, gnl\|Mm7\|chr5 (65374250-65373754)