Ss1.1-Mixn-0024i11.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCTTCAGGCAAAATGAAAATCCTCGTGGTATTTCTGGTGGCACTGACCATCTTTGGGACA CAATCTCACGGAAATGAGGTTTATAATATCATCAGCTCAACCGCCAACGGTGGCCAGATT CAGGAGACAATGACAATTGACAATGAAAAAAATACTGCCACCGTTAACATCCAGGCAGGA TCATGCTCCTCTACCACGATTTTTGACTATAAACATGGCTACATCGCGTCCAGGGTGCTC TCCCGAAGAGCTTGCTACATCCTGAAGATGGACCACAAAGCCATTCCTGCGCTGGACGAA CTCAAACGGTACACCTTTGAGAAGCAGACTCTGAAGAACATGTTCTCTGATAAATACATC TGGGTCAAGTACAACCCACTGCGGTCTCTGATCACAAATGTGAATTGGTTCCTGTTTGGG TCACCCATCAGGCAACTCTGCGAAAATGTCCCCTTGTATAAGGGGGAAGTGGTTGATAAG ACAAATGAAGCCAGTGCTGGAGCCTGTGCAAAGGTGGGGCTCCTGGGCATCTTGGGAATT TCCGTCTGCGCAGACCTTCATGTTTAAGGCATCAGCCCACTGGTTTCATCTTTTCAAAGA AATACACCCTTGGTTTCCACCCAACAGCCCAATTAAATTCTTTCTCAATGCCCCAACTAA TACTGAGATTCGGTAGTAAAACATAATAATATATTTGTAACTATCTGGGTGTGTGCTTTT TTGTGTAAACAGCAAAGGGCAGCCAAACAATGTTTACATCAATATACGGAAGGAAAGAAA TTGCCAAGATTTCAAATAAAGTGCATAATGTAAAAAAAAAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCTTCAGGCAAAATGAAAATCCTCGTGGTATTTCTGGTGGCACTGACCATCTTTGGGACA CAATCTCACGGAAATGAGGTTTATAATATCATCAGCTCAACCGCCAACGGTGGCCAGATT CAGGAGACAATGACAATTGACAATGAAAAAAATACTGCCACCGTTAACATCCAGGCAGGA TCATGCTCCTCTACCACGATTTTTGACTATAAACATGGCTACATCGCGTCCAGGGTGCTC TCCCGAAGAGCTTGCTACATCCTGAAGATGGACCACAAAGCCATTCCTGCGCTGGACGAA CTCAAACGGTACACCTTTGAGAAGCAGACTCTGAAGAACATGTTCTCTGATAAATACATC TGGGTCAAGTACAACCCACTGCGGTCTCTGATCACAAATGTGAATTGGTTCCTGTTTGGG TCACCCATCAGGCAACTCTGCGAAAATGTCCCCTTGTATAAGGGGGAAGTGGTTGATAAG ACAAATGAAGCCAGTGCTGGAGCCTGTGCAAAGGTGGGGCTCCTGGGCATCTTGGGAATT TCCGTCTGCGCAGACCTTCATGTTTAAGGCATCAGCCCACTGGTTTCATCTTTTCAAAGA AATACACCCTTGGTTTCCACCCAACAGCCCAATTAAATTCTTTCTCAATGCCCCAACTAA TACTGAGATTCGGTAGTAAAACATAATAATATATTTGTAACTATCTGGGTGTGTGCTTTT TTGTGTAAACAGCAAAGGGCAGCCAAACAATGTTTACATCAATATACGGAAGGAAAGAAA TTGCCAAGATTTCAAATAAAGTGCATAATGTAAAAAAAAAAAAAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 30 entry(ies) | More info |
| Aligned organism(s): 30 entry(ies) | Help | Less info |
| 77-217, gnl|bosTau2|chr11 (49403191-49403331) | |
| 77-217, gnl|canFam2|chr10 (70924488-70924867) | |
| 77-217, gnl|dasNov1|scaffold_1790 (115537-115909) | |
| 77-217, gnl|echTel1|scaffold_321162 (48892-48523) | |
| 77-217, gnl|hg17|chr2 (69088768-69089162) | |
| 77-217, gnl|Hg17|chr2 (69089048-69088908) | |
| 77-217, gnl|loxAfr1|scaffold_3566 (14680-14272) | |
| 77-217, gnl|mm7|chr6 (87451121-87450733) | |
| 77-217, gnl|Mm7|chr6 (87450841-87450981) | |
| 77-217, gnl|monDom2|scaffold_1 (95523871-95524277) | |
| 77-217, gnl|oryCun1|scaffold_86835 (4487-4871) | |
| 77-217, gnl|panTro1|chr12 (71323484-71323878) | |
| 77-217, gnl|rheMac2|chr13 (69177157-69177593) | |
| 77-217, gnl|rn3|chr4 (121771363-121770988) | |
| 326-483, gnl|bosTau2|chr11 (49405901-49406058) | |
| 326-483, gnl|canFam2|chr10 (70921434-70921756) | |
| 326-483, gnl|dasNov1|scaffold_1790 (113087-113414) | |
| 326-483, gnl|echTel1|scaffold_36275 (1482-1163) | |
| 326-483, gnl|hg17|chr2 (69085081-69085418) | |
| 326-483, gnl|Hg17|chr2 (69085245-69085088) | |
| 326-483, gnl|mm7|chr6 (87453376-87453047) | |
| 326-483, gnl|Mm7|chr6 (87453210-87453367) | |
| 326-483, gnl|monDom2|scaffold_1 (95521957-95522260) | |
| 326-483, gnl|oryCun1|scaffold_86835 (588-898) | |
| 326-483, gnl|panTro1|chr12 (71319810-71320147) | |
| 326-483, gnl|rheMac2|chr13 (69173798-69174132) | |
| 326-483, gnl|rn3|chr4 (121773664-121773337) | |
| 494-816, gnl|bosTau2|chr11 (49407631-49407946) | |
| 494-816, gnl|Hg17|chr2 (69084224-69083898) | |
| 494-816, gnl|Mm7|chr6 (87454316-87454689) |
| Aligned organism(s): 30 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 77-217, gnl|bosTau2|chr11 (49403191-49403331) | |
| 77-217, gnl|canFam2|chr10 (70924488-70924867) | |
| 77-217, gnl|dasNov1|scaffold_1790 (115537-115909) | |
| 77-217, gnl|echTel1|scaffold_321162 (48892-48523) | |
| 77-217, gnl|hg17|chr2 (69088768-69089162) | |
| 77-217, gnl|Hg17|chr2 (69089048-69088908) | |
| 77-217, gnl|loxAfr1|scaffold_3566 (14680-14272) | |
| 77-217, gnl|mm7|chr6 (87451121-87450733) | |
| 77-217, gnl|Mm7|chr6 (87450841-87450981) | |
| 77-217, gnl|monDom2|scaffold_1 (95523871-95524277) | |
| 77-217, gnl|oryCun1|scaffold_86835 (4487-4871) | |
| 77-217, gnl|panTro1|chr12 (71323484-71323878) | |
| 77-217, gnl|rheMac2|chr13 (69177157-69177593) | |
| 77-217, gnl|rn3|chr4 (121771363-121770988) | |
| 326-483, gnl|bosTau2|chr11 (49405901-49406058) | |
| 326-483, gnl|canFam2|chr10 (70921434-70921756) | |
| 326-483, gnl|dasNov1|scaffold_1790 (113087-113414) | |
| 326-483, gnl|echTel1|scaffold_36275 (1482-1163) | |
| 326-483, gnl|hg17|chr2 (69085081-69085418) | |
| 326-483, gnl|Hg17|chr2 (69085245-69085088) | |
| 326-483, gnl|mm7|chr6 (87453376-87453047) | |
| 326-483, gnl|Mm7|chr6 (87453210-87453367) | |
| 326-483, gnl|monDom2|scaffold_1 (95521957-95522260) | |
| 326-483, gnl|oryCun1|scaffold_86835 (588-898) | |
| 326-483, gnl|panTro1|chr12 (71319810-71320147) | |
| 326-483, gnl|rheMac2|chr13 (69173798-69174132) | |
| 326-483, gnl|rn3|chr4 (121773664-121773337) | |
| 494-816, gnl|bosTau2|chr11 (49407631-49407946) | |
| 494-816, gnl|Hg17|chr2 (69084224-69083898) | |
| 494-816, gnl|Mm7|chr6 (87454316-87454689) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| sto (6.47366) | |
| cst (3.78098) | |
| lin (0.145603) |