Non-Coding RNA Search

Ss1.1-Mixn-0024l14.5

Sequence:


               
               CAGCCCCGACGACCTGGCGGCCCCTTCCCCCAANCAATGGCTTCGGCTCGCTGCGCGGCT
CGTACTTATCCGCTCAGGATGATGTGGATCTCTACACAGACTCGGAGCCGAGGGCCGCTT
ACCGGAGGCAGGACGCCCTGCGGCCGGATGTCTGGGTGGTCAGGAACGACGCACCCCGTC
TACCACAAGCGCTCGCCCCCTGCCAAAGAGTCCTCCCTCTCCAAGTGCCAAAACTGCGGT
CTGTCCTGCAGCTCCTCCCTCTGCCAGCGCTGTGACAGCCTGCTTGCCTGCTCCCCGGCC
TCCAAGCCCAGCGCCTTCCCCAGCAAGGCCTCTGCCCACGACAGCCTGGCCCACGGGTCG
TCTCTGCGGGAGAAGTACGCAGGCCAGACTCAGGGCCTTGACCGGCCCCCGCACCTCCAC
TCGAAATCGAAGCCCTCCGCCTCGGCCACCTCCCGCTGTGGCTTCTGTAACCGCCCCGGG
GCCACCAACACCTGCACCCAGTGTTCAAAAGTCTCCTGCGACACCTGCCTCAGCGCCTAC
CATTACGACCCCTGCTGCAAAAAGAGTGAGCTGCACAAGTTCATGCCCAACAACCAGCTG
AACTACAAGTCCACCCAGTTCTCCCATCTCGTGTACAGATAGACTTGACCTTGCATCTCC
CTGTCACAAGGGCTACACCACTGACTTCGGTTTCATAGGAAAGAAATGCCGATGCATGGA
TCTGGGAAGCAGAGATCTACACCTGACCATCTGGTTGTCGGGGGTCCTGGGACCAGCCGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAGCCCCGACGACCTGGCGGCCCCTTCCCCCAANCAATGGCTTCGGCTCGCTGCGCGGCT
CGTACTTATCCGCTCAGGATGATGTGGATCTCTACACAGACTCGGAGCCGAGGGCCGCTT
ACCGGAGGCAGGACGCCCTGCGGCCGGATGTCTGGGTGGTCAGGAACGACGCACCCCGTC
TACCACAAGCGCTCGCCCCCTGCCAAAGAGTCCTCCCTCTCCAAGTGCCAAAACTGCGGT
CTGTCCTGCAGCTCCTCCCTCTGCCAGCGCTGTGACAGCCTGCTTGCCTGCTCCCCGGCC
TCCAAGCCCAGCGCCTTCCCCAGCAAGGCCTCTGCCCACGACAGCCTGGCCCACGGGTCG
TCTCTGCGGGAGAAGTACGCAGGCCAGACTCAGGGCCTTGACCGGCCCCCGCACCTCCAC
TCGAAATCGAAGCCCTCCGCCTCGGCCACCTCCCGCTGTGGCTTCTGTAACCGCCCCGGG
GCCACCAACACCTGCACCCAGTGTTCAAAAGTCTCCTGCGACACCTGCCTCAGCGCCTAC
CATTACGACCCCTGCTGCAAAAAGAGTGAGCTGCACAAGTTCATGCCCAACAACCAGCTG
AACTACAAGTCCACCCAGTTCTCCCATCTCGTGTACAGATAGACTTGACCTTGCATCTCC
CTGTCACAAGGGCTACACCACTGACTTCGGTTTCATAGGAAAGAAATGCCGATGCATGGA
TCTGGGAAGCAGAGATCTACACCTGACCATCTGGTTGTCGGGGGTCCTGGGACCAGCCGC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               3-733, gnl|bosTau2|chr13 (59929841-59930581)
               

               
               3-733, gnl|Hg17|chr20 (47956203-47955469)
               

               
               3-733, gnl|Mm7|chr2 (167224647-167223928)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-733, gnl|bosTau2|chr13 (59929841-59930581)
               

               
               3-733, gnl|Hg17|chr20 (47956203-47955469)
               

               
               3-733, gnl|Mm7|chr2 (167224647-167223928)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               ill (0.175593)
               

               
               cag (0.151194)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ill (0.175593)
               

               
               cag (0.151194)

	3-733, gnl\|bosTau2\|chr13 (59929841-59930581)
	3-733, gnl\|Hg17\|chr20 (47956203-47955469)
	3-733, gnl\|Mm7\|chr2 (167224647-167223928)