Ss1.1-Mixn-0025n06.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTCGCTGTCCGGCCGGCCTTTCGCGCGGGCTCCTGCAGCCAGGATGGGCCGGAAGGTGAC CGTGGCCACCTGCGCGCTCAACCAGTGGGCCCTGGACTTCGAGGGCAATTTGCAAAGGAT TTTAAAGAGTATTGAAATTGCGAAACACAAAGGAGCAAAATACAGGCTTGGACCGGAGCT GGAAATATGCGGCTACGGATGCTGGGACCATTATTATGAGTCGGACACCCTCCTGCATTC GCTCCAGGTCCTGGCTGCCCTTTTGGAATCTCCGGTCACTCAGGATATCATCTGTGACGT GGGAATGCCCGTGATGCACCGCAATGTCCGGTACAACTGCAGGGTGATATTCCTCAACAG GAAGATCCTGCTCATCAGACCCAAGATGGCCTTGGCCAATGAGGGCAACTACCGGGAGCT GCGCTGGTTTACCCCGTGGTCCAGGAGTCGGCAAACAGAGGAGTATTTTCTCCCCCGGAT GATTCAGGACCTGACGAAGCAGGAAACCGTGCCCTTTGGGGACGCCGTGCTCTCCACCCG GGACACCTGCATCGGGAGTGAGGTCTGCGAGGAACTCTGGACGCCCCACAGCCCGCACGT GGACATGGGCCTGGACGGTGTGGAGATCTTCACCAACGCCTCGGGCAGCCACCACGTGCT GCGCAAAGCCCACGCCAGGGTGGACCTCGTGACCATGGCCACCACCAAGAACGGCGGGAT TTACCTGCTGGCCAATCAGAAGGGCTGCGACGGGGACCGGCTCTACTACGACGGCTGCGC CCTGATAGCCATGAACGGCAGCAT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTCGCTGTCCGGCCGGCCTTTCGCGCGGGCTCCTGCAGCCAGGATGGGCCGGAAGGTGAC CGTGGCCACCTGCGCGCTCAACCAGTGGGCCCTGGACTTCGAGGGCAATTTGCAAAGGAT TTTAAAGAGTATTGAAATTGCGAAACACAAAGGAGCAAAATACAGGCTTGGACCGGAGCT GGAAATATGCGGCTACGGATGCTGGGACCATTATTATGAGTCGGACACCCTCCTGCATTC GCTCCAGGTCCTGGCTGCCCTTTTGGAATCTCCGGTCACTCAGGATATCATCTGTGACGT GGGAATGCCCGTGATGCACCGCAATGTCCGGTACAACTGCAGGGTGATATTCCTCAACAG GAAGATCCTGCTCATCAGACCCAAGATGGCCTTGGCCAATGAGGGCAACTACCGGGAGCT GCGCTGGTTTACCCCGTGGTCCAGGAGTCGGCAAACAGAGGAGTATTTTCTCCCCCGGAT GATTCAGGACCTGACGAAGCAGGAAACCGTGCCCTTTGGGGACGCCGTGCTCTCCACCCG GGACACCTGCATCGGGAGTGAGGTCTGCGAGGAACTCTGGACGCCCCACAGCCCGCACGT GGACATGGGCCTGGACGGTGTGGAGATCTTCACCAACGCCTCGGGCAGCCACCACGTGCT GCGCAAAGCCCACGCCAGGGTGGACCTCGTGACCATGGCCACCACCAAGAACGGCGGGAT TTACCTGCTGGCCAATCAGAAGGGCTGCGACGGGGACCGGCTCTACTACGACGGCTGCGC CCTGATAGCCATGAACGGCAGCAT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 33 entry(ies) | More info |
| Aligned organism(s): 33 entry(ies) | Help | Less info |
| 5-130, gnl|bosTau2|chr29 (43052684-43052810) | |
| 5-130, gnl|Hg17|chr11 (70841950-70842077) | |
| 5-130, gnl|Mm7|chr7 (140250042-140249937) | |
| 191-307, gnl|bosTau2|chr29 (43055963-43056079) | |
| 191-307, gnl|canFam2|chr18 (50272393-50272246) | |
| 191-307, gnl|danRer3|chr22 (33858169-33858026) | |
| 191-307, gnl|dasNov1|scaffold_189088 (3292-3446) | |
| 191-307, gnl|echTel1|scaffold_272155 (259-113) | |
| 191-307, gnl|fr1|chrUn (318855613-318855744) | |
| 191-307, gnl|hg17|chr11 (70847120-70847266) | |
| 191-307, gnl|Hg17|chr11 (70847123-70847239) | |
| 191-307, gnl|loxAfr1|scaffold_115513 (2663-2796) | |
| 191-307, gnl|mm7|chr7 (140246493-140246341) | |
| 191-307, gnl|Mm7|chr7 (140246488-140246372) | |
| 191-307, gnl|oryCun1|scaffold_146812 (4269-4137) | |
| 191-307, gnl|panTro1|chr9 (72102772-72102918) | |
| 191-307, gnl|rheMac2|chr14 (3456198-3456052) | |
| 191-307, gnl|rn3|chr1 (204366572-204366424) | |
| 191-307, gnl|tetNig1|chrUn_random (32921701-32921835) | |
| 585-717, gnl|bosTau2|chr29 (43065499-43065631) | |
| 585-717, gnl|canFam2|chr18 (50260702-50260549) | |
| 585-717, gnl|danRer3|chr22 (33853402-33853261) | |
| 585-717, gnl|dasNov1|scaffold_111316 (1173-1011) | |
| 585-717, gnl|echTel1|scaffold_108240 (532-366) | |
| 585-717, gnl|hg17|chr11 (70862243-70862415) | |
| 585-717, gnl|Hg17|chr11 (70862256-70862388) | |
| 585-717, gnl|mm7|chr7 (140239909-140239740) | |
| 585-717, gnl|Mm7|chr7 (140239890-140239762) | |
| 585-717, gnl|monDom2|scaffold_153 (1158504-1158351) | |
| 585-717, gnl|panTro1|chr9 (72118144-72118317) | |
| 585-717, gnl|rheMac2|chr14 (3441047-3440875) | |
| 585-717, gnl|rn3|chr1 (204356988-204356819) | |
| 585-717, gnl|tetNig1|chrUn_random (32925221-32925366) |
| Aligned organism(s): 33 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 5-130, gnl|bosTau2|chr29 (43052684-43052810) | |
| 5-130, gnl|Hg17|chr11 (70841950-70842077) | |
| 5-130, gnl|Mm7|chr7 (140250042-140249937) | |
| 191-307, gnl|bosTau2|chr29 (43055963-43056079) | |
| 191-307, gnl|canFam2|chr18 (50272393-50272246) | |
| 191-307, gnl|danRer3|chr22 (33858169-33858026) | |
| 191-307, gnl|dasNov1|scaffold_189088 (3292-3446) | |
| 191-307, gnl|echTel1|scaffold_272155 (259-113) | |
| 191-307, gnl|fr1|chrUn (318855613-318855744) | |
| 191-307, gnl|hg17|chr11 (70847120-70847266) | |
| 191-307, gnl|Hg17|chr11 (70847123-70847239) | |
| 191-307, gnl|loxAfr1|scaffold_115513 (2663-2796) | |
| 191-307, gnl|mm7|chr7 (140246493-140246341) | |
| 191-307, gnl|Mm7|chr7 (140246488-140246372) | |
| 191-307, gnl|oryCun1|scaffold_146812 (4269-4137) | |
| 191-307, gnl|panTro1|chr9 (72102772-72102918) | |
| 191-307, gnl|rheMac2|chr14 (3456198-3456052) | |
| 191-307, gnl|rn3|chr1 (204366572-204366424) | |
| 191-307, gnl|tetNig1|chrUn_random (32921701-32921835) | |
| 585-717, gnl|bosTau2|chr29 (43065499-43065631) | |
| 585-717, gnl|canFam2|chr18 (50260702-50260549) | |
| 585-717, gnl|danRer3|chr22 (33853402-33853261) | |
| 585-717, gnl|dasNov1|scaffold_111316 (1173-1011) | |
| 585-717, gnl|echTel1|scaffold_108240 (532-366) | |
| 585-717, gnl|hg17|chr11 (70862243-70862415) | |
| 585-717, gnl|Hg17|chr11 (70862256-70862388) | |
| 585-717, gnl|mm7|chr7 (140239909-140239740) | |
| 585-717, gnl|Mm7|chr7 (140239890-140239762) | |
| 585-717, gnl|monDom2|scaffold_153 (1158504-1158351) | |
| 585-717, gnl|panTro1|chr9 (72118144-72118317) | |
| 585-717, gnl|rheMac2|chr14 (3441047-3440875) | |
| 585-717, gnl|rn3|chr1 (204356988-204356819) | |
| 585-717, gnl|tetNig1|chrUn_random (32925221-32925366) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| pla (0.133672) | |
| eep (0.122564) |