Non-Coding RNA Search

Ss1.1-Mixn-0026c01.5

Sequence:


               
               TACCTCCNTGATTCATCCTCTGTTTCCCACGGGCCAGTGGCCGGGGTGACGGGTGCCCCC
CCCGCCCTGGTGCACTCCAGCGCACTCCCGGACCCCAACATGCTGGTGTCCGACTGCACG
GCTTCCTCCTCGGACCTGGGCTCAGCCATCGAAAAGATCATCGAGTCCACCATCGGGCCC
GAGCTCATCCAGAGCTGCATCACTGTGACCAGTGCTGAGGATAGTGGGGCCAAGACGACA
CAGTACCTGATCCTGCAAGGGCCTGATGATGGTGCCCCCATGGCATCACCGATGTCCAGT
TCCACCTTGGCCCACAGCCTGGCAGCCATTGAGGCCCTGGCCGATGGGCCCACATCCACA
TCTACGTGCCTGGAGCCACCTGAGGAGGCTCAGGGTGGGCCCAGCTCCCCAGTGCAGCCA
CCCCTGGGTTCTGGCACCGAGGAGCCGGACCTGCAGAGCCTGGAGGCCATGATGGAGGTG
GTGGTGGTGCAGCAGTTCAAGTGCAAGATGTGCCAGTACCGGAGCAGCACCAAGGCCACG
CTGTTGCGCCACATGCGAGAACGGCACTTCCGCCCAGCAGCAGCAGCTGGTAAGAAGGGA
CGTCTGCGCAAGTGGGGCCCCTCAGCCAAGACCCAGGAGGAAGAGGGCCCAGAGGAGGAA
GATGACGATGACATTGTAGATGCCGGTGCCATCGATGACCTGGAGGAGGACAGCGACTAC
AACCCTGCTGAGGACGAGCCCCGGGGCCGGCAGCTGCGGCCCCAGCGCCCTGCTCCCAGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TACCTCCNTGATTCATCCTCTGTTTCCCACGGGCCAGTGGCCGGGGTGACGGGTGCCCCC
CCCGCCCTGGTGCACTCCAGCGCACTCCCGGACCCCAACATGCTGGTGTCCGACTGCACG
GCTTCCTCCTCGGACCTGGGCTCAGCCATCGAAAAGATCATCGAGTCCACCATCGGGCCC
GAGCTCATCCAGAGCTGCATCACTGTGACCAGTGCTGAGGATAGTGGGGCCAAGACGACA
CAGTACCTGATCCTGCAAGGGCCTGATGATGGTGCCCCCATGGCATCACCGATGTCCAGT
TCCACCTTGGCCCACAGCCTGGCAGCCATTGAGGCCCTGGCCGATGGGCCCACATCCACA
TCTACGTGCCTGGAGCCACCTGAGGAGGCTCAGGGTGGGCCCAGCTCCCCAGTGCAGCCA
CCCCTGGGTTCTGGCACCGAGGAGCCGGACCTGCAGAGCCTGGAGGCCATGATGGAGGTG
GTGGTGGTGCAGCAGTTCAAGTGCAAGATGTGCCAGTACCGGAGCAGCACCAAGGCCACG
CTGTTGCGCCACATGCGAGAACGGCACTTCCGCCCAGCAGCAGCAGCTGGTAAGAAGGGA
CGTCTGCGCAAGTGGGGCCCCTCAGCCAAGACCCAGGAGGAAGAGGGCCCAGAGGAGGAA
GATGACGATGACATTGTAGATGCCGGTGCCATCGATGACCTGGAGGAGGACAGCGACTAC
AACCCTGCTGAGGACGAGCCCCGGGGCCGGCAGCTGCGGCCCCAGCGCCCTGCTCCCAGT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               1-194, gnl|bosTau2|chr13 (54554549-54554356)
               

               
               1-194, gnl|Hg17|chr20 (44031689-44031496)
               

               
               1-194, gnl|Mm7|chr2 (164650052-164649859)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-194, gnl|bosTau2|chr13 (54554549-54554356)
               

               
               1-194, gnl|Hg17|chr20 (44031689-44031496)
               

               
               1-194, gnl|Mm7|chr2 (164650052-164649859)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pla (0.133672)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.133672)

	1-194, gnl\|bosTau2\|chr13 (54554549-54554356)
	1-194, gnl\|Hg17\|chr20 (44031689-44031496)
	1-194, gnl\|Mm7\|chr2 (164650052-164649859)