Ss1.1-Mixn-0026h06.5
|
CTCTACTACCTGGCAGAACTAATAGAAGAATACACAGTGGCCACCAGCAGGATCATAAAA
TACATGATCTGGTTCTCCACAGCCGTGCTGATCGGCCTCTACGTTTTTGAGCACTTCCCG
ACCGGCATGATTGGCGTGGGCCTCTTCACCAACCTTGTCTACTTTGGCCTCCTCCAGACC
TTCCCCTTCATCATGCTGACCTCGCCTAACTTCATCCTGTCGTGCGGGCTAGTGGTGGTG
AATCATTACCTGGCGTTTCAGTTTTTTGCAGAGGAATATTATCCTTTCTCAGAGGTCCTG
GCCTATTTCACTTTCTGTCTGTGGATAATCCCGTTTGCCTTCTTTGTGTCCCTGTCGGCT
GGGGAGAACGTCCTGCCCTCCACCATGCAGCCAGGAGATGATGTGGTCTCCAATTACTTC
ACCAAAGGCAAGCGGGGCAAGCGCTTAGGGATCCTGGTTGTCTTCTCCTTCATCAAAGAG
GCCATTCTACCCAGTCGGCAGAAGATATACTGACCCCCTGGGGAGGGGATGCTGGGCGGG
ATCAGGAGGGTCAGGCCCCCGGGCCTCTGCACTAGGTGGCGGCCGGGAGCCGGAAGTCAC
GTCCCCCCAACCCTGGCCCCCCTTCCCTCGACACCCCCAGAAGCCCCTGACCCCACCCTC
CTGGGGAGGCTCAGCTTGGCACAGATATGATGCCGCCAGAGGCCGAGACCTCAGAGGGCG
CCGGGGGAGGGGAGGTGTGGTGCCTGCTTTGCAGGAGGCCGAGTCCACCTGTGGGTGCAG
AAGCTGAGCTCCAGTGGCCCTCCTGCCCCTTCCTGGACTGGGAGTTCCGGCTTGGCCAGG
GCATGCAGGGCCAGGGCCATGACGCTGGAGAGCAGACAGTGCTGGGTTCTCTGGGCAGAT
GGCCGTGGGGAGGGGCCACAGCTTGGCCCTTGCAAGAGAAAGTTTTTGCTGTTGAACTGT
GATTTCTGCCCAAGTGCTGATTCCCATTTGAATAAAGATTCTAGGTGGCACTGTTTGCCT |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CTCTACTACCTGGCAGAACTAATAGAAGAATACACAGTGGCCACCAGCAGGATCATAAAA
TACATGATCTGGTTCTCCACAGCCGTGCTGATCGGCCTCTACGTTTTTGAGCACTTCCCG
ACCGGCATGATTGGCGTGGGCCTCTTCACCAACCTTGTCTACTTTGGCCTCCTCCAGACC
TTCCCCTTCATCATGCTGACCTCGCCTAACTTCATCCTGTCGTGCGGGCTAGTGGTGGTG
AATCATTACCTGGCGTTTCAGTTTTTTGCAGAGGAATATTATCCTTTCTCAGAGGTCCTG
GCCTATTTCACTTTCTGTCTGTGGATAATCCCGTTTGCCTTCTTTGTGTCCCTGTCGGCT
GGGGAGAACGTCCTGCCCTCCACCATGCAGCCAGGAGATGATGTGGTCTCCAATTACTTC
ACCAAAGGCAAGCGGGGCAAGCGCTTAGGGATCCTGGTTGTCTTCTCCTTCATCAAAGAG
GCCATTCTACCCAGTCGGCAGAAGATATACTGACCCCCTGGGGAGGGGATGCTGGGCGGG
ATCAGGAGGGTCAGGCCCCCGGGCCTCTGCACTAGGTGGCGGCCGGGAGCCGGAAGTCAC
GTCCCCCCAACCCTGGCCCCCCTTCCCTCGACACCCCCAGAAGCCCCTGACCCCACCCTC
CTGGGGAGGCTCAGCTTGGCACAGATATGATGCCGCCAGAGGCCGAGACCTCAGAGGGCG
CCGGGGGAGGGGAGGTGTGGTGCCTGCTTTGCAGGAGGCCGAGTCCACCTGTGGGTGCAG
AAGCTGAGCTCCAGTGGCCCTCCTGCCCCTTCCTGGACTGGGAGTTCCGGCTTGGCCAGG
GCATGCAGGGCCAGGGCCATGACGCTGGAGAGCAGACAGTGCTGGGTTCTCTGGGCAGAT
GGCCGTGGGGAGGGGCCACAGCTTGGCCCTTGCAAGAGAAAGTTTTTGCTGTTGAACTGT
GATTTCTGCCCAAGTGCTGATTCCCATTTGAATAAAGATTCTAGGTGGCACTGTTTGCCT |
|
gi|55596679|ref|XP_515535.1| |
Protein identifier
|
gi|55596679|ref|XP_515535.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
Human gene identifier and UTR site,
human gene reading direction
|
72-227, gnl|bosTau2|chr11 (9991657-9991502) |
|
72-227, gnl|canFam2|chr10 (72456438-72456641) |
|
72-227, gnl|danRer3|chr6 (3854011-3853832) |
|
72-227, gnl|dasNov1|scaffold_7238 (81785-81583) |
|
72-227, gnl|fr1|chrUn (150483557-150483384) |
|
72-227, gnl|hg17|chr2 (71130586-71130791) |
|
72-227, gnl|Hg17|chr2 (71130769-71130614) |
|
72-227, gnl|loxAfr1|scaffold_51382 (5085-5290) |
|
72-227, gnl|mm7|chr6 (83799069-83799270) |
|
72-227, gnl|Mm7|chr6 (83799249-83799094) |
|
72-227, gnl|monDom2|scaffold_157 (925178-924980) |
|
72-227, gnl|oryCun1|scaffold_211293 (46084-45881) |
|
72-227, gnl|panTro1|chr12 (73461886-73462091) |
|
72-227, gnl|rheMac2|chr13 (71293069-71293274) |
|
72-227, gnl|rn3|chr4 (118210991-118211192) |
|
72-227, gnl|tetNig1|chrUn_random (21653432-21653268) |
|
72-227, gnl|xenTro1|scaffold_140 (244836-244647) |
| |
|
396-1020, gnl|bosTau2|chr11 (9989109-9988488) |
|
396-1020, gnl|Hg17|chr2 (71127502-71126893) |
|
396-1020, gnl|Mm7|chr6 (83796690-83796139) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
72-227, gnl|bosTau2|chr11 (9991657-9991502) |
|
72-227, gnl|canFam2|chr10 (72456438-72456641) |
|
72-227, gnl|danRer3|chr6 (3854011-3853832) |
|
72-227, gnl|dasNov1|scaffold_7238 (81785-81583) |
|
72-227, gnl|fr1|chrUn (150483557-150483384) |
|
72-227, gnl|hg17|chr2 (71130586-71130791) |
|
72-227, gnl|Hg17|chr2 (71130769-71130614) |
|
72-227, gnl|loxAfr1|scaffold_51382 (5085-5290) |
|
72-227, gnl|mm7|chr6 (83799069-83799270) |
|
72-227, gnl|Mm7|chr6 (83799249-83799094) |
|
72-227, gnl|monDom2|scaffold_157 (925178-924980) |
|
72-227, gnl|oryCun1|scaffold_211293 (46084-45881) |
|
72-227, gnl|panTro1|chr12 (73461886-73462091) |
|
72-227, gnl|rheMac2|chr13 (71293069-71293274) |
|
72-227, gnl|rn3|chr4 (118210991-118211192) |
|
72-227, gnl|tetNig1|chrUn_random (21653432-21653268) |
|
72-227, gnl|xenTro1|scaffold_140 (244836-244647) |
| |
|
396-1020, gnl|bosTau2|chr11 (9989109-9988488) |
|
396-1020, gnl|Hg17|chr2 (71127502-71126893) |
|
396-1020, gnl|Mm7|chr6 (83796690-83796139) |
|
col (0.195008) |
|
nlu (0.191681) |
|
hlv (0.139256) |
|
eep (0.122564) |
|
ecc (0.115035) |
|
jej (0.0989218) |
|
col (0.195008) |
|
nlu (0.191681) |
|
hlv (0.139256) |
|
eep (0.122564) |
|
ecc (0.115035) |
|
jej (0.0989218) |
