Ss1.1-Mixn-0026p09.5
|
CCGGAACGCGCGGCGCAGGCGGCGCGGATCGCTGGGAGCCGGTCCGCGGCCGGAACGGGG
TCCCGGGTGTGCGTGTGGAGCGGGGCTCGGGGCGTCCGCCGCGATGAACACGGTGCTGTC
GCGGGCGAACTCGTTGTTCGCCTTCTCGCTGAGCGTGATGGCGGCGCTCACTTTCGGCTG
TTTCATCACCACCGCCTTCAAAGACCGGAGCGTCCCGGTGCGGCTGCACGTCTCTCGGAT
CATGCTAAAAAATGTAGAAGACTTCACTGGACCTAGAGAAAGAAGTGATCTTGGATTCAT
TACTTTTGATATAACTGCTGATCTAGAAAATATATTTGATTGGAATGTTAAGCAGTTGTT
TCTTTATTTATCAGCAGAATATTCAACAAAAAATAATGCCCTGAACCAAGTTGTCCTTTG
GGACAAGATTGTTCTGAGGGGTGATAATCCGAAGCTGCTGTTGAAAGATATGAAAACAAA
GTATTTTTTCTTTGACGATGGAAATGGTCTCAAGGGAAACAGGAATGTCACTTTAACCCT
ATCTTGGAATGTTGTACCAAATGCTGGAATTCTACCTCTTGTGACAGGATCAGGACATGT
GTCTGTCCCATTTCCAGATACATATGAAATAACGAAGAGTTATTAAATTATTCTGAATTT
GAAACAACATATTTTTATACCTAATGAATCGTATTTCATTTATCTCTTCCCTTGCATCTT
CATTTGTTTTTAGTTGTTAACTTTTTGGGGGGGGGCACAAGAGTGAACATCAAAAGGCAT
ATTTGAAGGGAAAGATTAAAGTGCTACTTAAACTTAATTTTACAAACAGAAACAAAGGCC
ACTAGAGTGGAGTATCATAAGGATTTGTAAAATATTTATATTTGAAGTATTCCCTGTATT
TCCATTATTCTTTATGGAATATGAAGTGAGCATGAAGGGCAGTTAAACCTTTCTGGTGCC
TGTGGAGTTAGAGGAACCCTGTGCTTTGCACTTATGCAGGTTCACATTGGGTGTGATTTA
GAAGCAGACATTCTCTCTTAGCTCTTTGAGGGTATGTCTAAATACTGGAAAAATTAAGTT
GTTGAGAAGTCTGTTTTACAAAATAGCCAAAAGTGATGGAATTTTATTCCGTTTGTCTAA
AGAATGCCCACAATGCTTGGTTTTCTTATAGGAGACTGGCAACTTGCTCCACTAAAGACT
AAATACCTCTTTACATGCTGTAAATCATTCTAAATCATTTTAAAGTCTCTTAAGTCAATC
CAATGTGTGTTTCTCAGTGCTTTTTTAAAAAAAGTTCCTTGGTATTAAAAAAAAAAAAAA |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CCGGAACGCGCGGCGCAGGCGGCGCGGATCGCTGGGAGCCGGTCCGCGGCCGGAACGGGG
TCCCGGGTGTGCGTGTGGAGCGGGGCTCGGGGCGTCCGCCGCGATGAACACGGTGCTGTC
GCGGGCGAACTCGTTGTTCGCCTTCTCGCTGAGCGTGATGGCGGCGCTCACTTTCGGCTG
TTTCATCACCACCGCCTTCAAAGACCGGAGCGTCCCGGTGCGGCTGCACGTCTCTCGGAT
CATGCTAAAAAATGTAGAAGACTTCACTGGACCTAGAGAAAGAAGTGATCTTGGATTCAT
TACTTTTGATATAACTGCTGATCTAGAAAATATATTTGATTGGAATGTTAAGCAGTTGTT
TCTTTATTTATCAGCAGAATATTCAACAAAAAATAATGCCCTGAACCAAGTTGTCCTTTG
GGACAAGATTGTTCTGAGGGGTGATAATCCGAAGCTGCTGTTGAAAGATATGAAAACAAA
GTATTTTTTCTTTGACGATGGAAATGGTCTCAAGGGAAACAGGAATGTCACTTTAACCCT
ATCTTGGAATGTTGTACCAAATGCTGGAATTCTACCTCTTGTGACAGGATCAGGACATGT
GTCTGTCCCATTTCCAGATACATATGAAATAACGAAGAGTTATTAAATTATTCTGAATTT
GAAACAACATATTTTTATACCTAATGAATCGTATTTCATTTATCTCTTCCCTTGCATCTT
CATTTGTTTTTAGTTGTTAACTTTTTGGGGGGGGGCACAAGAGTGAACATCAAAAGGCAT
ATTTGAAGGGAAAGATTAAAGTGCTACTTAAACTTAATTTTACAAACAGAAACAAAGGCC
ACTAGAGTGGAGTATCATAAGGATTTGTAAAATATTTATATTTGAAGTATTCCCTGTATT
TCCATTATTCTTTATGGAATATGAAGTGAGCATGAAGGGCAGTTAAACCTTTCTGGTGCC
TGTGGAGTTAGAGGAACCCTGTGCTTTGCACTTATGCAGGTTCACATTGGGTGTGATTTA
GAAGCAGACATTCTCTCTTAGCTCTTTGAGGGTATGTCTAAATACTGGAAAAATTAAGTT
GTTGAGAAGTCTGTTTTACAAAATAGCCAAAAGTGATGGAATTTTATTCCGTTTGTCTAA
AGAATGCCCACAATGCTTGGTTTTCTTATAGGAGACTGGCAACTTGCTCCACTAAAGACT
AAATACCTCTTTACATGCTGTAAATCATTCTAAATCATTTTAAAGTCTCTTAAGTCAATC
CAATGTGTGTTTCTCAGTGCTTTTTTAAAAAAAGTTCCTTGGTATTAAAAAAAAAAAAAA |
|
gi|37183206|gb|AAQ89403.1| |
Protein identifier
|
gi|37183206|gb|AAQ89403.1| |
|
398-517, gnl|bosTau2|chr27 (2212699-2212818) |
|
398-517, gnl|canFam2|chr16 (56226595-56226416) |
|
398-517, gnl|danRer3|chrNA (59932782-59932942) |
|
398-517, gnl|fr1|chrUn (17411069-17410878) |
|
398-517, gnl|galGal2|chr4 (44984098-44984285) |
|
398-517, gnl|hg17|chr4 (177623429-177623609) |
|
398-517, gnl|Hg17|chr4 (177623462-177623581) |
|
398-517, gnl|loxAfr1|scaffold_23396 (23268-23093) |
|
398-517, gnl|mm7|chr8 (53294020-53293844) |
|
398-517, gnl|Mm7|chr8 (53293987-53293869) |
|
398-517, gnl|monDom2|scaffold_9 (55862900-55863078) |
|
398-517, gnl|oryCun1|scaffold_200819 (10428-10246) |
|
398-517, gnl|panTro1|chr3 (195589689-195589869) |
|
398-517, gnl|rheMac2|chr5 (168405761-168405941) |
|
398-517, gnl|rn3|chr16 (40219544-40219721) |
|
398-517, gnl|tetNig1|chrUn_random (88500775-88500937) |
|
398-517, gnl|xenTro1|scaffold_25 (443140-442965) |
| |
|
650-1307, gnl|bosTau2|chr27 (2213870-2214536) |
|
650-1307, gnl|Hg17|chr4 (177624634-177625339) |
|
650-1307, gnl|Mm7|chr8 (53292191-53291521) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
398-517, gnl|bosTau2|chr27 (2212699-2212818) |
|
398-517, gnl|canFam2|chr16 (56226595-56226416) |
|
398-517, gnl|danRer3|chrNA (59932782-59932942) |
|
398-517, gnl|fr1|chrUn (17411069-17410878) |
|
398-517, gnl|galGal2|chr4 (44984098-44984285) |
|
398-517, gnl|hg17|chr4 (177623429-177623609) |
|
398-517, gnl|Hg17|chr4 (177623462-177623581) |
|
398-517, gnl|loxAfr1|scaffold_23396 (23268-23093) |
|
398-517, gnl|mm7|chr8 (53294020-53293844) |
|
398-517, gnl|Mm7|chr8 (53293987-53293869) |
|
398-517, gnl|monDom2|scaffold_9 (55862900-55863078) |
|
398-517, gnl|oryCun1|scaffold_200819 (10428-10246) |
|
398-517, gnl|panTro1|chr3 (195589689-195589869) |
|
398-517, gnl|rheMac2|chr5 (168405761-168405941) |
|
398-517, gnl|rn3|chr16 (40219544-40219721) |
|
398-517, gnl|tetNig1|chrUn_random (88500775-88500937) |
|
398-517, gnl|xenTro1|scaffold_25 (443140-442965) |
| |
|
650-1307, gnl|bosTau2|chr27 (2213870-2214536) |
|
650-1307, gnl|Hg17|chr4 (177624634-177625339) |
|
650-1307, gnl|Mm7|chr8 (53292191-53291521) |
|
rec (1.21149) |
|
duo (1.03681) |
|
tes (0.831255) |
|
cbl (0.803582) |
|
vin (0.665115) |
|
ova (0.645661) |
|
fat (0.58971) |
|
cst (0.560146) |
|
kid (0.518941) |
|
pro (0.512033) |
|
sug (0.509165) |
|
thg (0.507164) |
|
mga (0.480615) |
|
isp (0.451128) |
|
mas (0.42061) |
|
amn (0.417711) |
|
hea (0.408998) |
|
fli (0.405762) |
|
aor (0.390549) |
|
col (0.390016) |
|
sto (0.359648) |
|
ton (0.351) |
|
sin (0.349895) |
|
cut (0.339847) |
|
cki (0.330469) |
|
cty (0.31224) |
|
sme (0.305437) |
|
lun (0.300978) |
|
ski (0.29347) |
|
lin (0.291206) |
|
spl (0.286369) |
|
csk (0.281492) |
|
che (0.272628) |
|
pla (0.267344) |
|
cbe (0.239234) |
|
pan (0.23596) |
|
mgp (0.230681) |
|
spc (0.226732) |
|
nms (0.213858) |
|
fcc (0.197785) |
|
nep (0.183925) |
|
mgm (0.180343) |
|
nje (0.16592) |
|
cje (0.165235) |
|
csp (0.161186) |
|
eli (0.151814) |
|
liv (0.146284) |
|
pty (0.142714) |
|
lnt (0.142308) |
|
nca (0.136874) |
|
ste (0.135208) |
|
lyg (0.133103) |
|
tra (0.123092) |
|
pgl (0.118483) |
|
med (0.116252) |
|
jca (0.11396) |
|
jej (0.0989218) |
|
rec (1.21149) |
|
duo (1.03681) |
|
tes (0.831255) |
|
cbl (0.803582) |
|
vin (0.665115) |
|
ova (0.645661) |
|
fat (0.58971) |
|
cst (0.560146) |
|
kid (0.518941) |
|
pro (0.512033) |
|
sug (0.509165) |
|
thg (0.507164) |
|
mga (0.480615) |
|
isp (0.451128) |
|
mas (0.42061) |
|
amn (0.417711) |
|
hea (0.408998) |
|
fli (0.405762) |
|
aor (0.390549) |
|
col (0.390016) |
|
sto (0.359648) |
|
ton (0.351) |
|
sin (0.349895) |
|
cut (0.339847) |
|
cki (0.330469) |
|
cty (0.31224) |
|
sme (0.305437) |
|
lun (0.300978) |
|
ski (0.29347) |
|
lin (0.291206) |
|
spl (0.286369) |
|
csk (0.281492) |
|
che (0.272628) |
|
pla (0.267344) |
|
cbe (0.239234) |
|
pan (0.23596) |
|
mgp (0.230681) |
|
spc (0.226732) |
|
nms (0.213858) |
|
fcc (0.197785) |
|
nep (0.183925) |
|
mgm (0.180343) |
|
nje (0.16592) |
|
cje (0.165235) |
|
csp (0.161186) |
|
eli (0.151814) |
|
liv (0.146284) |
|
pty (0.142714) |
|
lnt (0.142308) |
|
nca (0.136874) |
|
ste (0.135208) |
|
lyg (0.133103) |
|
tra (0.123092) |
|
pgl (0.118483) |
|
med (0.116252) |
|
jca (0.11396) |
|
jej (0.0989218) |
