Ss1.1-Mixn-0027d04.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGTCGTGGCGCAGTGGTTAACAAGTCCGACTGGGAACCCGCCACCTCATGGTTTTTAGTC GGATTCGTTGACCACTGCGCCGCGACGGGCACCCCCCGGTGAAGTATTTTTAACAAGGAA AGAAATACACTAAATATTCCAAGAGTGGCAATTTCCAAATTGATTTGTTTTTTCATCGAC TTTCCCGCATGCAGGAGGCAGGAGGGGACGGTGTTTGCATGGGATGCAGTTTACAGTTCA GTAACGCTCTTAAACCCAGTAGGAAACCGGTGTCGGGAACGCGCTGTGTGCCGGGCGTGC TGGAGGCCGGGGCACGGGCTTAGGCAGCTGCCTCATCTTCTCTCTGACCCCGCAGGTCGT CTGGGGCAAAGAAGCAGCAGGCCCATGAGAGCTCCAGGCCCCTGTCCATCGAGCGTCCTG GGGCCGTGCACCCTTGGGTCAGCGCCCAGCTCCGCAACTCCGTCCAGCCCTCGCATCTCT TCATTCAAGACCCCACGATGCCGCCCAACCCGGCCCCCAACCCCCTGACGCAGCTGGAGG AGGCCCGCCGGCGTCTGGAGGAGGAGGAGAAGCGAGCCAGCAAGGTGCCCTCCAAGCAGA GGACGAAATCGCAGAGGAAGGCAGGCGGAGGGAGTGCCCAGCCGTGCGATAGCATCGTTG TGGCCTATTACTTCTGTGGGGAGCCCATCCCCTACCGGACCCTGGTGAGGGGCCGCGCGG TCACGCTGGGCCAGTTCAAGGAGCTGCTGACCAAGAAAGGCAACTACAGATACTACTTCA AGAAAGTGAGCGACGAGTTCGACTGCGGCGTGGTGTTTGAGGAGGTGCGCGAGGACGAGG CCGTCCTGCCCGTGTTTGAGGAGAAGATCATTGGCAAGGTGGAGAAGGTGGACTGACCAG CAGGCTGGCCTCTGAGCCAGACTGGACCCCTGTCAGCTGGGGGCAGGG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGTCGTGGCGCAGTGGTTAACAAGTCCGACTGGGAACCCGCCACCTCATGGTTTTTAGTC GGATTCGTTGACCACTGCGCCGCGACGGGCACCCCCCGGTGAAGTATTTTTAACAAGGAA AGAAATACACTAAATATTCCAAGAGTGGCAATTTCCAAATTGATTTGTTTTTTCATCGAC TTTCCCGCATGCAGGAGGCAGGAGGGGACGGTGTTTGCATGGGATGCAGTTTACAGTTCA GTAACGCTCTTAAACCCAGTAGGAAACCGGTGTCGGGAACGCGCTGTGTGCCGGGCGTGC TGGAGGCCGGGGCACGGGCTTAGGCAGCTGCCTCATCTTCTCTCTGACCCCGCAGGTCGT CTGGGGCAAAGAAGCAGCAGGCCCATGAGAGCTCCAGGCCCCTGTCCATCGAGCGTCCTG GGGCCGTGCACCCTTGGGTCAGCGCCCAGCTCCGCAACTCCGTCCAGCCCTCGCATCTCT TCATTCAAGACCCCACGATGCCGCCCAACCCGGCCCCCAACCCCCTGACGCAGCTGGAGG AGGCCCGCCGGCGTCTGGAGGAGGAGGAGAAGCGAGCCAGCAAGGTGCCCTCCAAGCAGA GGACGAAATCGCAGAGGAAGGCAGGCGGAGGGAGTGCCCAGCCGTGCGATAGCATCGTTG TGGCCTATTACTTCTGTGGGGAGCCCATCCCCTACCGGACCCTGGTGAGGGGCCGCGCGG TCACGCTGGGCCAGTTCAAGGAGCTGCTGACCAAGAAAGGCAACTACAGATACTACTTCA AGAAAGTGAGCGACGAGTTCGACTGCGGCGTGGTGTTTGAGGAGGTGCGCGAGGACGAGG CCGTCCTGCCCGTGTTTGAGGAGAAGATCATTGGCAAGGTGGAGAAGGTGGACTGACCAG CAGGCTGGCCTCTGAGCCAGACTGGACCCCTGTCAGCTGGGGGCAGGG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 337-602, gnl|bosTau2|chr25 (1533269-1533533) | |
| 337-602, gnl|canFam2|chr6 (43255863-43255682) | |
| 337-602, gnl|danRer3|chr11 (8894555-8894389) | |
| 337-602, gnl|dasNov1|scaffold_2100 (18600-18494) | |
| 337-602, gnl|echTel1|scaffold_319308 (41975-42079) | |
| 337-602, gnl|fr1|chrUn (105365068-105365231) | |
| 337-602, gnl|galGal2|chr14 (14075222-14075041) | |
| 337-602, gnl|hg17|chr16 (283499-283665) | |
| 337-602, gnl|Hg17|chr16 (283737-283488) | |
| 337-602, gnl|loxAfr1|scaffold_21198 (6892-7033) | |
| 337-602, gnl|mm7|chr17 (24373463-24373282) | |
| 337-602, gnl|Mm7|chr17 (24373211-24373472) | |
| 337-602, gnl|monDom2|scaffold_49 (8517886-8518067) | |
| 337-602, gnl|panTro1|chr18 (305365-305531) | |
| 337-602, gnl|rheMac2|chr20 (270985-271166) | |
| 337-602, gnl|rn3|chr10 (15458771-15458590) | |
| 337-602, gnl|tetNig1|chr3 (12035277-12035116) | |
| 337-602, gnl|xenTro1|scaffold_142 (259103-259284) | |
| 763-914, gnl|bosTau2|chr25 (1537239-1537390) | |
| 763-914, gnl|Hg17|chr16 (278256-278101) | |
| 763-914, gnl|Mm7|chr17 (24378168-24378323) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 337-602, gnl|bosTau2|chr25 (1533269-1533533) | |
| 337-602, gnl|canFam2|chr6 (43255863-43255682) | |
| 337-602, gnl|danRer3|chr11 (8894555-8894389) | |
| 337-602, gnl|dasNov1|scaffold_2100 (18600-18494) | |
| 337-602, gnl|echTel1|scaffold_319308 (41975-42079) | |
| 337-602, gnl|fr1|chrUn (105365068-105365231) | |
| 337-602, gnl|galGal2|chr14 (14075222-14075041) | |
| 337-602, gnl|hg17|chr16 (283499-283665) | |
| 337-602, gnl|Hg17|chr16 (283737-283488) | |
| 337-602, gnl|loxAfr1|scaffold_21198 (6892-7033) | |
| 337-602, gnl|mm7|chr17 (24373463-24373282) | |
| 337-602, gnl|Mm7|chr17 (24373211-24373472) | |
| 337-602, gnl|monDom2|scaffold_49 (8517886-8518067) | |
| 337-602, gnl|panTro1|chr18 (305365-305531) | |
| 337-602, gnl|rheMac2|chr20 (270985-271166) | |
| 337-602, gnl|rn3|chr10 (15458771-15458590) | |
| 337-602, gnl|tetNig1|chr3 (12035277-12035116) | |
| 337-602, gnl|xenTro1|scaffold_142 (259103-259284) | |
| 763-914, gnl|bosTau2|chr25 (1537239-1537390) | |
| 763-914, gnl|Hg17|chr16 (278256-278101) | |
| 763-914, gnl|Mm7|chr17 (24378168-24378323) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| pla (0.133672) |