Ss1.1-Mixn-0027d08.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGGACCGGGACTTCATCATGACCTTCAACACATCCCTGCACCGCTCCTGGTGGATGGAGA ATGGGCCAGGCTGCCTGGTGACACCTGTCTTGAACTCCCGTCTGGCCCTGGAAGACCACC ATGTCATCTCGGTCACCGGCTGCCTGCTTGACTATCCCTACATCGAAGCACTTAGCAGTG CCCTGCAGATCTTCCTGGCCCTGTTCGGCTTCGTGTTTGCCTGCTACGTGAGCAAAGTAT TCCTGGAGGAGGAGGACAGCTTTGACTTCATCGGCGGTTTTGATTCCTACGGATACCAGG CGCCGCAGAAGACTTCGCATTTACAACTGCAGCCTCTGTACACGTCCGGGTAGCTTCTGC CCGGCGCCCACCCCCGCGGCTAGACTGACGCGGCTGCCTCGAGCTCCCGCCAAGATTGCA GGCGCGCCCCCTGGCGGCTTTCTGACCAGACTGCAGCCTGCATCGGCTCGATCAGGGTCT GAAGTGGACTTGGACTTGACCCTTAGAAACCTGGACTCAAGGGGTGGGGCGGGGCGGGGA GGGGCGGGGGAGGGGGATCGCGGAGTTTGTATTTTTTTTATCTCAGCCTTGGCTTGTGCT AGAGCCTCCCTTCCTTCTCCAGCCTCTCCCTTTCACCCTTCACCCAGCATCCTGTCCCCT GTCCAGAGAGAAAGGGCAGGACAGACGCACCCCATCTCACCACACTCATTCACCAGCCCT GGGGAAAGTTACTGTGAACTAGGAGCAGGAGTCCTGGGCTCTAATCACAGCTCCATCACT CTCTGTGTGATAACTGGCAAGGCCCTTGCCCTCTGGGCCTCAGTTTCCCACCTCAATTAA AATAATCCCTGAGTACACAGAGCTCTTTCTAGCCTTTTCATTTGATTCTCAACTCCGTGG ACAATATTGGGATTTTACTGTAATCTCCATTTAGCAGATAGGGAAACTGAGGCCCAGAGA TGTAAAGTGATTTGCTTAAAGCCACAGAGCTAGACTTTTGTTGGAGGCAGGCCTTGAACG CAGGGTGTGATTTGTAGTTTCAGACTCCAAAACCCGGTGTCTGGTCTCTGAATTCCATCT CCAAGCTCCCTTGCAGCATGGACACTCTAGAACCCATTCGATATTACGCTTCCATACCAC TGCCACAACTTGCCCACGCCTCTCTTAAAGCAATATACCTGTTCTCCTGTTGGGAATGGG CTGGATGGATCCTAGAGCCCTGAATTCAGCCTGACCCACAGGGAAGCCTTCTTAGACTCA GTCCCTGTCCACCCTTGGCAAAAC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGGACCGGGACTTCATCATGACCTTCAACACATCCCTGCACCGCTCCTGGTGGATGGAGA ATGGGCCAGGCTGCCTGGTGACACCTGTCTTGAACTCCCGTCTGGCCCTGGAAGACCACC ATGTCATCTCGGTCACCGGCTGCCTGCTTGACTATCCCTACATCGAAGCACTTAGCAGTG CCCTGCAGATCTTCCTGGCCCTGTTCGGCTTCGTGTTTGCCTGCTACGTGAGCAAAGTAT TCCTGGAGGAGGAGGACAGCTTTGACTTCATCGGCGGTTTTGATTCCTACGGATACCAGG CGCCGCAGAAGACTTCGCATTTACAACTGCAGCCTCTGTACACGTCCGGGTAGCTTCTGC CCGGCGCCCACCCCCGCGGCTAGACTGACGCGGCTGCCTCGAGCTCCCGCCAAGATTGCA GGCGCGCCCCCTGGCGGCTTTCTGACCAGACTGCAGCCTGCATCGGCTCGATCAGGGTCT GAAGTGGACTTGGACTTGACCCTTAGAAACCTGGACTCAAGGGGTGGGGCGGGGCGGGGA GGGGCGGGGGAGGGGGATCGCGGAGTTTGTATTTTTTTTATCTCAGCCTTGGCTTGTGCT AGAGCCTCCCTTCCTTCTCCAGCCTCTCCCTTTCACCCTTCACCCAGCATCCTGTCCCCT GTCCAGAGAGAAAGGGCAGGACAGACGCACCCCATCTCACCACACTCATTCACCAGCCCT GGGGAAAGTTACTGTGAACTAGGAGCAGGAGTCCTGGGCTCTAATCACAGCTCCATCACT CTCTGTGTGATAACTGGCAAGGCCCTTGCCCTCTGGGCCTCAGTTTCCCACCTCAATTAA AATAATCCCTGAGTACACAGAGCTCTTTCTAGCCTTTTCATTTGATTCTCAACTCCGTGG ACAATATTGGGATTTTACTGTAATCTCCATTTAGCAGATAGGGAAACTGAGGCCCAGAGA TGTAAAGTGATTTGCTTAAAGCCACAGAGCTAGACTTTTGTTGGAGGCAGGCCTTGAACG CAGGGTGTGATTTGTAGTTTCAGACTCCAAAACCCGGTGTCTGGTCTCTGAATTCCATCT CCAAGCTCCCTTGCAGCATGGACACTCTAGAACCCATTCGATATTACGCTTCCATACCAC TGCCACAACTTGCCCACGCCTCTCTTAAAGCAATATACCTGTTCTCCTGTTGGGAATGGG CTGGATGGATCCTAGAGCCCTGAATTCAGCCTGACCCACAGGGAAGCCTTCTTAGACTCA GTCCCTGTCCACCCTTGGCAAAAC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 1-199, gnl|bosTau2|chr2 (75386966-75386768) | |
| 1-199, gnl|canFam2|chr2 (72704298-72704499) | |
| 1-199, gnl|canFam2|chr2 (72704490-72704298) | |
| 1-199, gnl|dasNov1|scaffold_56241 (3755-3957) | |
| 1-199, gnl|dasNov1|scaffold_56241 (3949-3756) | |
| 1-199, gnl|echTel1|scaffold_290448 (42762-42560) | |
| 1-199, gnl|echTel1|scaffold_290448 (42560-42769) | |
| 1-199, gnl|Hg17|chr1 (31325956-31325758) | |
| 1-199, gnl|hg17|chr13_random (151967-152166) | |
| 1-199, gnl|hg17|chr2 (91333163-91333356) | |
| 1-199, gnl|loxAfr1|scaffold_21024 (48602-48804) | |
| 1-199, gnl|loxAfr1|scaffold_21024 (48804-48603) | |
| 1-199, gnl|Mm7|chr2 (181444142-181443944) | |
| 1-199, gnl|panTro1|chr1 (116722614-116722420) | |
| 1-199, gnl|panTro1|chr1 (116722420-116722621) | |
| 1-199, gnl|rheMac2|chr1 (33955121-33954920) | |
| 1-199, gnl|rheMac2|chr1 (33954920-33955121) | |
| 1-199, gnl|rn3|chr5 (149708149-149707948) | |
| 1-199, gnl|rn3|chr5 (149707948-149708149) | |
| 835-1282, gnl|bosTau2|chr2 (75385746-75385295) | |
| 835-1282, gnl|Hg17|chr1 (31323109-31322689) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-199, gnl|bosTau2|chr2 (75386966-75386768) | |
| 1-199, gnl|canFam2|chr2 (72704298-72704499) | |
| 1-199, gnl|canFam2|chr2 (72704490-72704298) | |
| 1-199, gnl|dasNov1|scaffold_56241 (3755-3957) | |
| 1-199, gnl|dasNov1|scaffold_56241 (3949-3756) | |
| 1-199, gnl|echTel1|scaffold_290448 (42762-42560) | |
| 1-199, gnl|echTel1|scaffold_290448 (42560-42769) | |
| 1-199, gnl|Hg17|chr1 (31325956-31325758) | |
| 1-199, gnl|hg17|chr13_random (151967-152166) | |
| 1-199, gnl|hg17|chr2 (91333163-91333356) | |
| 1-199, gnl|loxAfr1|scaffold_21024 (48602-48804) | |
| 1-199, gnl|loxAfr1|scaffold_21024 (48804-48603) | |
| 1-199, gnl|Mm7|chr2 (181444142-181443944) | |
| 1-199, gnl|panTro1|chr1 (116722614-116722420) | |
| 1-199, gnl|panTro1|chr1 (116722420-116722621) | |
| 1-199, gnl|rheMac2|chr1 (33955121-33954920) | |
| 1-199, gnl|rheMac2|chr1 (33954920-33955121) | |
| 1-199, gnl|rn3|chr5 (149708149-149707948) | |
| 1-199, gnl|rn3|chr5 (149707948-149708149) | |
| 835-1282, gnl|bosTau2|chr2 (75385746-75385295) | |
| 835-1282, gnl|Hg17|chr1 (31323109-31322689) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ese (0.126502) | |
| eep (0.122564) | |
| med (0.116252) |