Ss1.1-Mixn-0027e13.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCATTCTCCCCTCCAGAGACTGATGCTGGAGCTTGAATTGATTTCCTTGGCTAGATCTGT CATTTTAGGTTCTAGTCATAGCACTTTTCAGAGCAACCTGGGTACCACTGCAGCACAGCT GCATCCTGTGGTGGTCGTTAGCCCCGGGGTCTTTGTTTCGCAAAATCCTTTGGTACTGTT GTGGTTTTCTATTCTTCCCGTTTACTCTCTTTCTCCTAACTCTGTTCAAAAGTATCTTAG CTCTTTTGGCCTTTCCTTTGACCTTTTTCCCTAATCCTGCTTTGGAATGAGCCAGTACGG GGAAAGGCACACCATGTCGGAGAGAAGGAAGAGTGTCTGTTGCTTCTTGAGGGTTTTCTA TTTACCTTTCTTATGTTGGCCAGTTCTTTTATTTATGCCCTTGTGGCCCAGGTACTTGGG GTGGGGGGCGCAGCTAACCTCCTGGCTTTTCAGTGTCTTTGAAGGACAGTTCTTTTATTT ATGCCCTTGTGGCCCAGGTACTTGGGGCGGGGGGCGCAGCTAACCTCCTGGCTTTTCAGT GTCTTTGAAGGAGACCAGGCACCAAGTGAACACCATGGAGAACGTCGGTGTGTTTCTAGA ACTTCAGCGGAGACCAAGCCCTGCTGCAAATTTGTCAGGCCAGGCAAAAGGGCCAGACAG TTGCAGCGATAGTGTAAATATTTTGTACAGTAAATAAATGAATGTTTAAAAGGAAAAAAA AAAAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCATTCTCCCCTCCAGAGACTGATGCTGGAGCTTGAATTGATTTCCTTGGCTAGATCTGT CATTTTAGGTTCTAGTCATAGCACTTTTCAGAGCAACCTGGGTACCACTGCAGCACAGCT GCATCCTGTGGTGGTCGTTAGCCCCGGGGTCTTTGTTTCGCAAAATCCTTTGGTACTGTT GTGGTTTTCTATTCTTCCCGTTTACTCTCTTTCTCCTAACTCTGTTCAAAAGTATCTTAG CTCTTTTGGCCTTTCCTTTGACCTTTTTCCCTAATCCTGCTTTGGAATGAGCCAGTACGG GGAAAGGCACACCATGTCGGAGAGAAGGAAGAGTGTCTGTTGCTTCTTGAGGGTTTTCTA TTTACCTTTCTTATGTTGGCCAGTTCTTTTATTTATGCCCTTGTGGCCCAGGTACTTGGG GTGGGGGGCGCAGCTAACCTCCTGGCTTTTCAGTGTCTTTGAAGGACAGTTCTTTTATTT ATGCCCTTGTGGCCCAGGTACTTGGGGCGGGGGGCGCAGCTAACCTCCTGGCTTTTCAGT GTCTTTGAAGGAGACCAGGCACCAAGTGAACACCATGGAGAACGTCGGTGTGTTTCTAGA ACTTCAGCGGAGACCAAGCCCTGCTGCAAATTTGTCAGGCCAGGCAAAAGGGCCAGACAG TTGCAGCGATAGTGTAAATATTTTGTACAGTAAATAAATGAATGTTTAAAAGGAAAAAAA AAAAAAAAAAAA |
| Aligned organism(s): 28 entry(ies) | More info |
| Aligned organism(s): 28 entry(ies) | Help | Less info |
| 8-447, gnl|bosTau2|chr10 (56274487-56274053) | |
| 8-447, gnl|canFam2|chr8 (50836422-50837278) | |
| 8-447, gnl|dasNov1|scaffold_3500 (61441-60588) | |
| 8-447, gnl|echTel1|scaffold_310755 (34980-35839) | |
| 8-447, gnl|hg17|chr14 (74197672-74198513) | |
| 8-447, gnl|Hg17|chr14 (74198331-74197889) | |
| 8-447, gnl|loxAfr1|scaffold_11488 (31114-31964) | |
| 8-447, gnl|mm7|chr12 (82918190-82919011) | |
| 8-447, gnl|Mm7|chr12 (82918838-82918405) | |
| 8-447, gnl|monDom2|scaffold_8 (59897312-59896510) | |
| 8-447, gnl|oryCun1|scaffold_210956 (82603-83512) | |
| 8-447, gnl|panTro1|chr15 (74198567-74199415) | |
| 8-447, gnl|rheMac2|chr7 (137770614-137771484) | |
| 8-447, gnl|rn3|chr6 (108966936-108967753) | |
| 467-721, gnl|bosTau2|chr10 (56274114-56273877) | |
| 467-721, gnl|canFam2|chr8 (50836422-50837278) | |
| 467-721, gnl|dasNov1|scaffold_3500 (61441-60588) | |
| 467-721, gnl|echTel1|scaffold_310755 (34980-35839) | |
| 467-721, gnl|hg17|chr14 (74197672-74198513) | |
| 467-721, gnl|Hg17|chr14 (74197953-74197705) | |
| 467-721, gnl|loxAfr1|scaffold_11488 (31114-31964) | |
| 467-721, gnl|mm7|chr12 (82918190-82919011) | |
| 467-721, gnl|Mm7|chr12 (82918464-82918226) | |
| 467-721, gnl|monDom2|scaffold_8 (59897312-59896510) | |
| 467-721, gnl|oryCun1|scaffold_210956 (82603-83512) | |
| 467-721, gnl|panTro1|chr15 (74198567-74199415) | |
| 467-721, gnl|rheMac2|chr7 (137770614-137771484) | |
| 467-721, gnl|rn3|chr6 (108966936-108967753) |
| Aligned organism(s): 28 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 8-447, gnl|bosTau2|chr10 (56274487-56274053) | |
| 8-447, gnl|canFam2|chr8 (50836422-50837278) | |
| 8-447, gnl|dasNov1|scaffold_3500 (61441-60588) | |
| 8-447, gnl|echTel1|scaffold_310755 (34980-35839) | |
| 8-447, gnl|hg17|chr14 (74197672-74198513) | |
| 8-447, gnl|Hg17|chr14 (74198331-74197889) | |
| 8-447, gnl|loxAfr1|scaffold_11488 (31114-31964) | |
| 8-447, gnl|mm7|chr12 (82918190-82919011) | |
| 8-447, gnl|Mm7|chr12 (82918838-82918405) | |
| 8-447, gnl|monDom2|scaffold_8 (59897312-59896510) | |
| 8-447, gnl|oryCun1|scaffold_210956 (82603-83512) | |
| 8-447, gnl|panTro1|chr15 (74198567-74199415) | |
| 8-447, gnl|rheMac2|chr7 (137770614-137771484) | |
| 8-447, gnl|rn3|chr6 (108966936-108967753) | |
| 467-721, gnl|bosTau2|chr10 (56274114-56273877) | |
| 467-721, gnl|canFam2|chr8 (50836422-50837278) | |
| 467-721, gnl|dasNov1|scaffold_3500 (61441-60588) | |
| 467-721, gnl|echTel1|scaffold_310755 (34980-35839) | |
| 467-721, gnl|hg17|chr14 (74197672-74198513) | |
| 467-721, gnl|Hg17|chr14 (74197953-74197705) | |
| 467-721, gnl|loxAfr1|scaffold_11488 (31114-31964) | |
| 467-721, gnl|mm7|chr12 (82918190-82919011) | |
| 467-721, gnl|Mm7|chr12 (82918464-82918226) | |
| 467-721, gnl|monDom2|scaffold_8 (59897312-59896510) | |
| 467-721, gnl|oryCun1|scaffold_210956 (82603-83512) | |
| 467-721, gnl|panTro1|chr15 (74198567-74199415) | |
| 467-721, gnl|rheMac2|chr7 (137770614-137771484) | |
| 467-721, gnl|rn3|chr6 (108966936-108967753) |
| Expressed library(ies): 7 entry(ies) | More info |
| Expressed library(ies): 7 entry(ies) | Help | Less info |
| fhi (0.339155) | |
| cga (0.279096) | |
| fcc (0.197785) | |
| nje (0.16592) | |
| cli (0.152812) | |
| cly (0.120642) | |
| ecc (0.115035) |
| Expressed library(ies): 7 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fhi (0.339155) | |
| cga (0.279096) | |
| fcc (0.197785) | |
| nje (0.16592) | |
| cli (0.152812) | |
| cly (0.120642) | |
| ecc (0.115035) |