Ss1.1-Mixn-0027m10.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GAAATCCAATACAGAGTGACTCAGTGGAACACCTACAGAAGTGACACTGTTCTACCACTA TGAAGAAAAGCAGTGTTGCCTTGCTTTTGGGTATCATCTTCCTGACTCTGATTGGAGTTC AAGGAACCCTACTAATGAGGAATGGACGTTGTTCCTGCATCAACACCAGCCAAAGGATGA TCCATTTAAAATCCTTAAGGGATCTTAAACAATTTGCCCCAAGCCCTTCTTGTGAGAAAA TGGAAGTCATTGCTACAATGAAGAATGGGGATCAAACATGTCTAAACCCAGATTCACCAG ATGTGAAAAAATTGATTAAAGAGTGGGAGAAACAGGTCAGCCTAAAGAAAAAGCAAAAGA AAGGGAAAAAACATCCAAAAACCAAGAAAGTTCGAAAAGTTAAAAAATCTCAACGTCCTG ATCAAAAGAAGATGACATGAGGGACCATGTTACCAACAAGTATTCTGTGTTAAAAAGCTT CTCTTTAACCACCCTGAAATAATTCCAAAAGGGGAGGGCATCTTAATGCATAAGCTTATT GATTTGACTAGAAAAAATAAAGCATTATTATGTCAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GAAATCCAATACAGAGTGACTCAGTGGAACACCTACAGAAGTGACACTGTTCTACCACTA TGAAGAAAAGCAGTGTTGCCTTGCTTTTGGGTATCATCTTCCTGACTCTGATTGGAGTTC AAGGAACCCTACTAATGAGGAATGGACGTTGTTCCTGCATCAACACCAGCCAAAGGATGA TCCATTTAAAATCCTTAAGGGATCTTAAACAATTTGCCCCAAGCCCTTCTTGTGAGAAAA TGGAAGTCATTGCTACAATGAAGAATGGGGATCAAACATGTCTAAACCCAGATTCACCAG ATGTGAAAAAATTGATTAAAGAGTGGGAGAAACAGGTCAGCCTAAAGAAAAAGCAAAAGA AAGGGAAAAAACATCCAAAAACCAAGAAAGTTCGAAAAGTTAAAAAATCTCAACGTCCTG ATCAAAAGAAGATGACATGAGGGACCATGTTACCAACAAGTATTCTGTGTTAAAAAGCTT CTCTTTAACCACCCTGAAATAATTCCAAAAGGGGAGGGCATCTTAATGCATAAGCTTATT GATTTGACTAGAAAAAATAAAGCATTATTATGTCAG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 47 entry(ies) | More info |
| Aligned organism(s): 47 entry(ies) | Help | Less info |
| 2-124, gnl|bosTau2|chr6 (50146421-50146541) | |
| 2-124, gnl|canFam2|chr32 (3523418-3523628) | |
| 2-124, gnl|dasNov1|scaffold_11293 (6487-6276) | |
| 2-124, gnl|echTel1|scaffold_27985 (666-887) | |
| 2-124, gnl|hg17|chr4 (77285612-77285818) | |
| 2-124, gnl|Hg17|chr4 (77285822-77285717) | |
| 2-124, gnl|mm7|chr5 (92315107-92315304) | |
| 2-124, gnl|Mm7|chr5 (92315307-92315209) | |
| 2-124, gnl|monDom2|scaffold_32 (29236590-29236777) | |
| 2-124, gnl|oryCun1|scaffold_206477 (15638-15445) | |
| 2-124, gnl|panTro1|chr3 (56440714-56440508) | |
| 2-124, gnl|rheMac2|chr5 (53580167-53579961) | |
| 2-124, gnl|rn3|chr14 (17284354-17284147) | |
| 134-250, gnl|bosTau2|chr6 (50147914-50148030) | |
| 134-250, gnl|canFam2|chr32 (3521636-3521764) | |
| 134-250, gnl|canFam2|chr32 (3521596-3521858) | |
| 134-250, gnl|dasNov1|scaffold_11293 (7640-7515) | |
| 134-250, gnl|dasNov1|scaffold_11293 (7681-7434) | |
| 134-250, gnl|echTel1|scaffold_316899 (42114-42313) | |
| 134-250, gnl|hg17|chr19 (46129534-46129683) | |
| 134-250, gnl|hg17|chr4 (77284443-77284689) | |
| 134-250, gnl|Hg17|chr4 (77284596-77284480) | |
| 134-250, gnl|loxAfr1|scaffold_11058 (12033-12242) | |
| 134-250, gnl|mm7|chr5 (92313967-92314182) | |
| 134-250, gnl|Mm7|chr5 (92314113-92313997) | |
| 134-250, gnl|monDom2|scaffold_32 (29234840-29235092) | |
| 134-250, gnl|oryCun1|scaffold_206477 (17011-16885) | |
| 134-250, gnl|oryCun1|scaffold_206477 (17051-16805) | |
| 134-250, gnl|panTro1|chr20 (43118366-43118515) | |
| 134-250, gnl|panTro1|chr3 (56441977-56441731) | |
| 134-250, gnl|rheMac2|chr19 (47310376-47310528) | |
| 134-250, gnl|rheMac2|chr5 (53581339-53581095) | |
| 134-250, gnl|rn3|chr14 (17285387-17285176) | |
| 332-573, gnl|bosTau2|chr6 (50150980-50151221) | |
| 332-573, gnl|canFam2|chr32 (3519411-3519747) | |
| 332-573, gnl|dasNov1|scaffold_11293 (10415-10025) | |
| 332-573, gnl|echTel1|scaffold_316899 (4142-4509) | |
| 332-573, gnl|hg17|chr4 (77281758-77282105) | |
| 332-573, gnl|Hg17|chr4 (77282035-77281797) | |
| 332-573, gnl|loxAfr1|scaffold_87850 (1081-779) | |
| 332-573, gnl|mm7|chr5 (92310867-92311224) | |
| 332-573, gnl|Mm7|chr5 (92311157-92310905) | |
| 332-573, gnl|monDom2|scaffold_32 (29228657-29228998) | |
| 332-573, gnl|oryCun1|scaffold_206477 (20436-20091) | |
| 332-573, gnl|panTro1|chr3 (56444663-56444316) | |
| 332-573, gnl|rheMac2|chr5 (53584024-53583675) | |
| 332-573, gnl|rn3|chr14 (17289066-17288738) |
| Aligned organism(s): 47 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 2-124, gnl|bosTau2|chr6 (50146421-50146541) | |
| 2-124, gnl|canFam2|chr32 (3523418-3523628) | |
| 2-124, gnl|dasNov1|scaffold_11293 (6487-6276) | |
| 2-124, gnl|echTel1|scaffold_27985 (666-887) | |
| 2-124, gnl|hg17|chr4 (77285612-77285818) | |
| 2-124, gnl|Hg17|chr4 (77285822-77285717) | |
| 2-124, gnl|mm7|chr5 (92315107-92315304) | |
| 2-124, gnl|Mm7|chr5 (92315307-92315209) | |
| 2-124, gnl|monDom2|scaffold_32 (29236590-29236777) | |
| 2-124, gnl|oryCun1|scaffold_206477 (15638-15445) | |
| 2-124, gnl|panTro1|chr3 (56440714-56440508) | |
| 2-124, gnl|rheMac2|chr5 (53580167-53579961) | |
| 2-124, gnl|rn3|chr14 (17284354-17284147) | |
| 134-250, gnl|bosTau2|chr6 (50147914-50148030) | |
| 134-250, gnl|canFam2|chr32 (3521636-3521764) | |
| 134-250, gnl|canFam2|chr32 (3521596-3521858) | |
| 134-250, gnl|dasNov1|scaffold_11293 (7640-7515) | |
| 134-250, gnl|dasNov1|scaffold_11293 (7681-7434) | |
| 134-250, gnl|echTel1|scaffold_316899 (42114-42313) | |
| 134-250, gnl|hg17|chr19 (46129534-46129683) | |
| 134-250, gnl|hg17|chr4 (77284443-77284689) | |
| 134-250, gnl|Hg17|chr4 (77284596-77284480) | |
| 134-250, gnl|loxAfr1|scaffold_11058 (12033-12242) | |
| 134-250, gnl|mm7|chr5 (92313967-92314182) | |
| 134-250, gnl|Mm7|chr5 (92314113-92313997) | |
| 134-250, gnl|monDom2|scaffold_32 (29234840-29235092) | |
| 134-250, gnl|oryCun1|scaffold_206477 (17011-16885) | |
| 134-250, gnl|oryCun1|scaffold_206477 (17051-16805) | |
| 134-250, gnl|panTro1|chr20 (43118366-43118515) | |
| 134-250, gnl|panTro1|chr3 (56441977-56441731) | |
| 134-250, gnl|rheMac2|chr19 (47310376-47310528) | |
| 134-250, gnl|rheMac2|chr5 (53581339-53581095) | |
| 134-250, gnl|rn3|chr14 (17285387-17285176) | |
| 332-573, gnl|bosTau2|chr6 (50150980-50151221) | |
| 332-573, gnl|canFam2|chr32 (3519411-3519747) | |
| 332-573, gnl|dasNov1|scaffold_11293 (10415-10025) | |
| 332-573, gnl|echTel1|scaffold_316899 (4142-4509) | |
| 332-573, gnl|hg17|chr4 (77281758-77282105) | |
| 332-573, gnl|Hg17|chr4 (77282035-77281797) | |
| 332-573, gnl|loxAfr1|scaffold_87850 (1081-779) | |
| 332-573, gnl|mm7|chr5 (92310867-92311224) | |
| 332-573, gnl|Mm7|chr5 (92311157-92310905) | |
| 332-573, gnl|monDom2|scaffold_32 (29228657-29228998) | |
| 332-573, gnl|oryCun1|scaffold_206477 (20436-20091) | |
| 332-573, gnl|panTro1|chr3 (56444663-56444316) | |
| 332-573, gnl|rheMac2|chr5 (53584024-53583675) | |
| 332-573, gnl|rn3|chr14 (17289066-17288738) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| lnt (0.426925) | |
| cag (0.151194) | |
| tra (0.123092) | |
| pgl (0.118483) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| lnt (0.426925) | |
| cag (0.151194) | |
| tra (0.123092) | |
| pgl (0.118483) |