Non-Coding RNA Search

Ss1.1-Mixn-0027n05.5

Sequence:


               
               GTGCTGGAGGGGTGAGGGTGTGAGGGTCCTGCGGGAGTGGCACCTGACAGCCAAGCTTCT
GCTGCCCTCTGCTGTACACTGGGAACAGCTGGCTCTGGGATGCAAGGCTGGCAGAAAGGG
CATGGGGCAGGGGGGCCAGACTGTGTGAGGGCCTCCCGGTGGCAGAATGCCCAGGGGCCC
TTGGGGGCATACCCTGATTCACTTGCTTCAAATAAAAAGTTCCCACCCCGCTGACGGCTC
TCAGGTATCCAGTGGCGATGGTCAGCAGCACCCGTTTCATTAGGAACAGAGCTGTGTTGT
CTGACCCTGCTGCTGGCAGGGAGCCAGCGACCCCCTTCCTCCCTGCTCCCTTCCCTCTGA
GGAGTAAGTAGGCACCCCAAGGTCAGCTGGTGCTGGGGTCAGAAGTTCATGGTGATGACA
CTCTGATGCTGGGCAAGTGTGACGAGTCTCTACCACCTGGGGCTGACTCACAGTCATGTT
CCTTCCTGGAGATCACAGACTTGGGGCCCACTGACACTGGAGTCTGTCCCTCGGTCACAT
CAAAGTCAACCAACATGGCCAAGGACAAGCCTGCCGTCCTCCTCTCCACCTCCCTCTGCT
GGGCAAATGTGCATCATTCTGCCACTCTCCGCCCTTGGTGTGATGTCAAGCAAGTGGACC
GATTTCCCTGAGCTGAGCTTCTCCATCAGTAAAGTCGATAATAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTGCTGGAGGGGTGAGGGTGTGAGGGTCCTGCGGGAGTGGCACCTGACAGCCAAGCTTCT
GCTGCCCTCTGCTGTACACTGGGAACAGCTGGCTCTGGGATGCAAGGCTGGCAGAAAGGG
CATGGGGCAGGGGGGCCAGACTGTGTGAGGGCCTCCCGGTGGCAGAATGCCCAGGGGCCC
TTGGGGGCATACCCTGATTCACTTGCTTCAAATAAAAAGTTCCCACCCCGCTGACGGCTC
TCAGGTATCCAGTGGCGATGGTCAGCAGCACCCGTTTCATTAGGAACAGAGCTGTGTTGT
CTGACCCTGCTGCTGGCAGGGAGCCAGCGACCCCCTTCCTCCCTGCTCCCTTCCCTCTGA
GGAGTAAGTAGGCACCCCAAGGTCAGCTGGTGCTGGGGTCAGAAGTTCATGGTGATGACA
CTCTGATGCTGGGCAAGTGTGACGAGTCTCTACCACCTGGGGCTGACTCACAGTCATGTT
CCTTCCTGGAGATCACAGACTTGGGGCCCACTGACACTGGAGTCTGTCCCTCGGTCACAT
CAAAGTCAACCAACATGGCCAAGGACAAGCCTGCCGTCCTCCTCTCCACCTCCCTCTGCT
GGGCAAATGTGCATCATTCTGCCACTCTCCGCCCTTGGTGTGATGTCAAGCAAGTGGACC
GATTTCCCTGAGCTGAGCTTCTCCATCAGTAAAGTCGATAATAAAAAAAAAAAAAAAAAA

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               9-706, gnl|bosTau2|chr8 (31434572-31435291)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               9-706, gnl|bosTau2|chr8 (31434572-31435291)

Expressed library(ies): 5 entry(ies)

More info

Expressed library(ies): 5 entry(ies)

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               fhi (0.339155)
               

               
               hyp (0.285673)
               

               
               fce (0.271592)
               

               
               fbs (0.175346)
               

               
               cov (0.132153)

Expressed library(ies): 5 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fhi (0.339155)
               

               
               hyp (0.285673)
               

               
               fce (0.271592)
               

               
               fbs (0.175346)
               

               
               cov (0.132153)

	fhi (0.339155)
	hyp (0.285673)
	fce (0.271592)
	fbs (0.175346)
	cov (0.132153)