Non-Coding RNA Search

Ss1.1-Mixn-0027o20.5

Sequence:


               
               CCCATGGAGCATGTAACCCCAAAGCCAGAGCCACACCTAGCATCGCCCAAGCCCACGTGA
ATGGTGCCTCCAATGCCCCATAGCCCAGTGAGTGGAGATAGTGTGGAGGAAGAGGAGGAG
GAAGAGAAGAAGGTGTGTCTGCCAGGCTTCACTGGCCTTGTCAATCTAGGCAACACCTGC
TTCATGAACAGCGTCATTCAGTCTCTGTCCAATACTCGGGAACTGCGGGACTTCTTCCAT
GACCGCTCCTTTGAGGCCGAGATCAACTATAACAACCCGCTGGGGACTGGTGGGCGTCTG
GCCATCGGTTTTGCTGTGCTGCTCCGGGCACTGTGGAAGGGAACCCACCATGCCTTCCAG
CCCTCCAAGTTGAAGGCCATTGTGGCGAGCAAAGCCAGCCAGTTCACAGGCTATGCACAG
CATGATGCCCAGGAGTTCATGGCTTTCCTGCTGGATGGGCTGCACGAGGACTTGAACCGA
ATTCAGAATAAGCCCTACACAGAGACTGTGGACTCAGACGGGCGCCCTGATGAGGTGGTA
GCTGAGGAAGCCTGGCAGCGGCACAAGATGAGGAATGATTCTTTCATCGTGGACCTATTT
CAGGGCCAATACAAGTCGAAGCTGGTGTGCCCTGTGTGTGCGAAGGTCTCCATCACTTTT
GACCCATTCCTGTACCTGCCGGTGCCCTTGCCGCAGAAGCAGAAGGTTCTCCCTGTCTTC
TATTTTGCGCGGGAGCCCCATAGCAAGCCCATCAAGTTTCTGGTGAGCATCAGCAAGGAG
AACTCCAGTGCGAGTGAAGTGTTGGACTCCCTCTCTCAGAGTGTCCACGTGAAGCCTGAG
AACCTGCGTCTGGCTGAGGTTATTAAGAATCGCTTCCACCGTGTGTTCTTGCCCTCCCAC
TCCCTGGACACTGTGTCCCCTTCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCCATGGAGCATGTAACCCCAAAGCCAGAGCCACACCTAGCATCGCCCAAGCCCACGTGA
ATGGTGCCTCCAATGCCCCATAGCCCAGTGAGTGGAGATAGTGTGGAGGAAGAGGAGGAG
GAAGAGAAGAAGGTGTGTCTGCCAGGCTTCACTGGCCTTGTCAATCTAGGCAACACCTGC
TTCATGAACAGCGTCATTCAGTCTCTGTCCAATACTCGGGAACTGCGGGACTTCTTCCAT
GACCGCTCCTTTGAGGCCGAGATCAACTATAACAACCCGCTGGGGACTGGTGGGCGTCTG
GCCATCGGTTTTGCTGTGCTGCTCCGGGCACTGTGGAAGGGAACCCACCATGCCTTCCAG
CCCTCCAAGTTGAAGGCCATTGTGGCGAGCAAAGCCAGCCAGTTCACAGGCTATGCACAG
CATGATGCCCAGGAGTTCATGGCTTTCCTGCTGGATGGGCTGCACGAGGACTTGAACCGA
ATTCAGAATAAGCCCTACACAGAGACTGTGGACTCAGACGGGCGCCCTGATGAGGTGGTA
GCTGAGGAAGCCTGGCAGCGGCACAAGATGAGGAATGATTCTTTCATCGTGGACCTATTT
CAGGGCCAATACAAGTCGAAGCTGGTGTGCCCTGTGTGTGCGAAGGTCTCCATCACTTTT
GACCCATTCCTGTACCTGCCGGTGCCCTTGCCGCAGAAGCAGAAGGTTCTCCCTGTCTTC
TATTTTGCGCGGGAGCCCCATAGCAAGCCCATCAAGTTTCTGGTGAGCATCAGCAAGGAG
AACTCCAGTGCGAGTGAAGTGTTGGACTCCCTCTCTCAGAGTGTCCACGTGAAGCCTGAG
AACCTGCGTCTGGCTGAGGTTATTAAGAATCGCTTCCACCGTGTGTTCTTGCCCTCCCAC
TCCCTGGACACTGTGTCCCCTTCT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               45-241, gnl|bosTau2|chr22 (40083819-40083623)
               

               
               45-241, gnl|Hg17|chr3 (49128077-49127881)
               

               
               45-241, gnl|Mm7|chr9 (108207774-108207970)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               45-241, gnl|bosTau2|chr22 (40083819-40083623)
               

               
               45-241, gnl|Hg17|chr3 (49128077-49127881)
               

               
               45-241, gnl|Mm7|chr9 (108207774-108207970)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cty (0.10408)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.10408)

	45-241, gnl\|bosTau2\|chr22 (40083819-40083623)
	45-241, gnl\|Hg17\|chr3 (49128077-49127881)
	45-241, gnl\|Mm7\|chr9 (108207774-108207970)