Ss1.1-Mixn-0028c18.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCCCCGCGCGCTGCGGGCCGGGCCGCGCCGAGCAGGGCTGTCTCTAGCCCTGAGGAGCCC CTCCTGGCCCTTGGCCATCGGGCCCCCGTTGCTGCTGGAGAATGAACCAGCCGCAGAGGA TGGCGCCCGTGGGCACGGACAAGGAGCTCAGTGACCTCCTGGACTTCAGCATGATGTTCC CCCTGCCGGTGGCCAACGGGAAGAGCCGGTCTGCCTCCCTGGCTGGTGCCCAGTTTGGAA GCTCAGGTCTGGAGGACCGGCCCAGTTCAGGCTCGTGGGGCGCCAGTGAGCAGAACAGCT CCTCCTTCGACCCCAGCCGGAGCTATGGTGAAGGTGCCCAGTTCAGCGAGTCCCACGCCA GCCTCTCTTCGTCCACATTCCTAGGACCCGGGCTCGGAGGCAAGGGCGGCGAGCGGGGCA CATACACCCCCTTTGGGAGAGACGCAGGGGTTGGCAGCCTGTCTCAGGCTGGCTTCCCTC CCAGTGAGCTGGCCCTTAGCAGCCCAGGGCCGCTGTCCCCCTCAGGTGTCAAGGGAGGGA CCCAGTATTATTCCTACTCTGGCCACCCTCGGAGGAGAACTGCGGACAGCGGTCTAGATG CACAGCCCAAGAAGGTCCGAAAGGTGCCACCAGGTCTCCCATCCTCGGTGTACCCACCCA GCTCAGGTGATGACTACAGCAGGAACACAGCCGCCTACCCGTCCACTAAGACGATCCCGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCCCCGCGCGCTGCGGGCCGGGCCGCGCCGAGCAGGGCTGTCTCTAGCCCTGAGGAGCCC CTCCTGGCCCTTGGCCATCGGGCCCCCGTTGCTGCTGGAGAATGAACCAGCCGCAGAGGA TGGCGCCCGTGGGCACGGACAAGGAGCTCAGTGACCTCCTGGACTTCAGCATGATGTTCC CCCTGCCGGTGGCCAACGGGAAGAGCCGGTCTGCCTCCCTGGCTGGTGCCCAGTTTGGAA GCTCAGGTCTGGAGGACCGGCCCAGTTCAGGCTCGTGGGGCGCCAGTGAGCAGAACAGCT CCTCCTTCGACCCCAGCCGGAGCTATGGTGAAGGTGCCCAGTTCAGCGAGTCCCACGCCA GCCTCTCTTCGTCCACATTCCTAGGACCCGGGCTCGGAGGCAAGGGCGGCGAGCGGGGCA CATACACCCCCTTTGGGAGAGACGCAGGGGTTGGCAGCCTGTCTCAGGCTGGCTTCCCTC CCAGTGAGCTGGCCCTTAGCAGCCCAGGGCCGCTGTCCCCCTCAGGTGTCAAGGGAGGGA CCCAGTATTATTCCTACTCTGGCCACCCTCGGAGGAGAACTGCGGACAGCGGTCTAGATG CACAGCCCAAGAAGGTCCGAAAGGTGCCACCAGGTCTCCCATCCTCGGTGTACCCACCCA GCTCAGGTGATGACTACAGCAGGAACACAGCCGCCTACCCGTCCACTAAGACGATCCCGC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 30 entry(ies) | More info |
| Aligned organism(s): 30 entry(ies) | Help | Less info |
| 458-600, gnl|bosTau2|chr7 (28409319-28409461) | |
| 458-600, gnl|canFam2|chr20 (60413680-60413585) | |
| 458-600, gnl|canFam2|chr20 (60413541-60413674) | |
| 458-600, gnl|danRer3|chr22 (20875230-20875133) | |
| 458-600, gnl|danRer3|chr22 (20875091-20875205) | |
| 458-600, gnl|echTel1|scaffold_44426 (4918-5019) | |
| 458-600, gnl|echTel1|scaffold_44426 (5063-4930) | |
| 458-600, gnl|fr1|chrUn (233850892-233850794) | |
| 458-600, gnl|galGal2|chr28 (1304964-1304872) | |
| 458-600, gnl|galGal2|chr28 (1304830-1304961) | |
| 458-600, gnl|hg17|chr19 (1576571-1576669) | |
| 458-600, gnl|Hg17|chr19 (1576717-1576572) | |
| 458-600, gnl|hg17|chr9 (5101272-5101407) | |
| 458-600, gnl|loxAfr1|scaffold_84489 (5385-5282) | |
| 458-600, gnl|loxAfr1|scaffold_84489 (5238-5379) | |
| 458-600, gnl|mm7|chr10 (80208190-80208288) | |
| 458-600, gnl|mm7|chr10 (80208332-80208196) | |
| 458-600, gnl|Mm7|chr10 (80208336-80208191) | |
| 458-600, gnl|monDom2|scaffold_75 (2283822-2283700) | |
| 458-600, gnl|oryCun1|scaffold_93832 (8286-8372) | |
| 458-600, gnl|oryCun1|scaffold_93832 (8416-8280) | |
| 458-600, gnl|panTro1|chr11_random (23965830-23965695) | |
| 458-600, gnl|panTro1|chr20 (1652851-1652949) | |
| 458-600, gnl|rheMac2|chr15 (72103917-72103782) | |
| 458-600, gnl|rheMac2|chr19 (1398287-1398385) | |
| 458-600, gnl|rn3|chr7 (10802136-10802038) | |
| 458-600, gnl|rn3|chr7 (10801994-10802130) | |
| 458-600, gnl|tetNig1|chr15 (4675551-4675649) | |
| 458-600, gnl|tetNig1|chr15 (4675685-4675574) | |
| 458-600, gnl|xenTro1|scaffold_667 (155998-156096) |
| Aligned organism(s): 30 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 458-600, gnl|bosTau2|chr7 (28409319-28409461) | |
| 458-600, gnl|canFam2|chr20 (60413680-60413585) | |
| 458-600, gnl|canFam2|chr20 (60413541-60413674) | |
| 458-600, gnl|danRer3|chr22 (20875230-20875133) | |
| 458-600, gnl|danRer3|chr22 (20875091-20875205) | |
| 458-600, gnl|echTel1|scaffold_44426 (4918-5019) | |
| 458-600, gnl|echTel1|scaffold_44426 (5063-4930) | |
| 458-600, gnl|fr1|chrUn (233850892-233850794) | |
| 458-600, gnl|galGal2|chr28 (1304964-1304872) | |
| 458-600, gnl|galGal2|chr28 (1304830-1304961) | |
| 458-600, gnl|hg17|chr19 (1576571-1576669) | |
| 458-600, gnl|Hg17|chr19 (1576717-1576572) | |
| 458-600, gnl|hg17|chr9 (5101272-5101407) | |
| 458-600, gnl|loxAfr1|scaffold_84489 (5385-5282) | |
| 458-600, gnl|loxAfr1|scaffold_84489 (5238-5379) | |
| 458-600, gnl|mm7|chr10 (80208190-80208288) | |
| 458-600, gnl|mm7|chr10 (80208332-80208196) | |
| 458-600, gnl|Mm7|chr10 (80208336-80208191) | |
| 458-600, gnl|monDom2|scaffold_75 (2283822-2283700) | |
| 458-600, gnl|oryCun1|scaffold_93832 (8286-8372) | |
| 458-600, gnl|oryCun1|scaffold_93832 (8416-8280) | |
| 458-600, gnl|panTro1|chr11_random (23965830-23965695) | |
| 458-600, gnl|panTro1|chr20 (1652851-1652949) | |
| 458-600, gnl|rheMac2|chr15 (72103917-72103782) | |
| 458-600, gnl|rheMac2|chr19 (1398287-1398385) | |
| 458-600, gnl|rn3|chr7 (10802136-10802038) | |
| 458-600, gnl|rn3|chr7 (10801994-10802130) | |
| 458-600, gnl|tetNig1|chr15 (4675551-4675649) | |
| 458-600, gnl|tetNig1|chr15 (4675685-4675574) | |
| 458-600, gnl|xenTro1|scaffold_667 (155998-156096) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| clu (0.119646) |